Chlamydomonas reinhardtii      Asp-Based PTP      FCP

※ FCP family introduction

    FCP/SCP phosphatase belongs to a family of phosphatase which uses an Asp nucleophile for catalysis. FCP/SCP is characterized by its phosphatase activity towards the CTD of the largest subunit of RNA polymerase II (1). At least seven members have been identified in human genome and FCP/SCP phosphatases share a conserved catalytic signature, which is known as DXDXT/V (2). Family member FCP1 is conserved among all eukaryotes and plays a important role in cell survival in budding and fission yeasts. SCP1 preferentially dephosphorylate Ser5 in CTD domain of RNA polymerase II and play a role in the regulation of gene expression by controlling the transition from initiation/capping to processive transcript elongation (3). In addition, SCP1 also act as a key regulator that functions in silencing neuronal gene expression (4).

Reference
1. Shi, Y. (2009) Serine/threonine phosphatases: mechanism through structure. Cell, 139, 468-484. PMID: 19879837
2. Moorhead, G.B., Trinkle-Mulcahy, L. and Ulke-Lemee, A. (2007) Emerging roles of nuclear protein phosphatases. Nat Rev Mol Cell Biol, 8, 234-244. PMID: 17318227
3. Yeo, M., Lin, P.S., Dahmus, M.E. and Gill, G.N. (2003) A novel RNA polymerase II C-terminal domain phosphatase that preferentially dephosphorylates serine 5. J Biol Chem, 278, 26078-26085. PMID: 12721286
4. Yeo, M., Lee, S.K., Lee, B., Ruiz, E.C., Pfaff, S.L. and Gill, G.N. (2005) Small CTD phosphatases function in silencing neuronal gene expression. Science, 307, 596-600. PMID: 15681389


There are 8 genes.  Reviewed (0 or Unreviewed (8

No.StatusEKPD IDGene IDGene Name
1
EPS-CHR-00043
CHLREDRAFT_142839
CHLREDRAFT_142839
2
EPS-CHR-00042
CHLREDRAFT_187551
CHLREDRAFT_187551
3
EPS-CHR-00040
CHLREDRAFT_111940
CHLREDRAFT_111940
4
EPS-CHR-00039
CHLREDRAFT_149388
CHLREDRAFT_149388
5
EPS-CHR-00041
CHLREDRAFT_169672
CHLREDRAFT_169672; TIM50
6
EPS-CHR-00044
CHLREDRAFT_141879
CHLREDRAFT_141879
7
EPS-CHR-00045
CHLREDRAFT_187332
CGL55; CHLREDRAFT_187332
8
EPS-CHR-00038
CHLREDRAFT_118402
CHLREDRAFT_118402