Hordeum vulgare      Asp-Based PTP      FCP

※ FCP family introduction

    FCP/SCP phosphatase belongs to a family of phosphatase which uses an Asp nucleophile for catalysis. FCP/SCP is characterized by its phosphatase activity towards the CTD of the largest subunit of RNA polymerase II (1). At least seven members have been identified in human genome and FCP/SCP phosphatases share a conserved catalytic signature, which is known as DXDXT/V (2). Family member FCP1 is conserved among all eukaryotes and plays a important role in cell survival in budding and fission yeasts. SCP1 preferentially dephosphorylate Ser5 in CTD domain of RNA polymerase II and play a role in the regulation of gene expression by controlling the transition from initiation/capping to processive transcript elongation (3). In addition, SCP1 also act as a key regulator that functions in silencing neuronal gene expression (4).

Reference
1. Shi, Y. (2009) Serine/threonine phosphatases: mechanism through structure. Cell, 139, 468-484. PMID: 19879837
2. Moorhead, G.B., Trinkle-Mulcahy, L. and Ulke-Lemee, A. (2007) Emerging roles of nuclear protein phosphatases. Nat Rev Mol Cell Biol, 8, 234-244. PMID: 17318227
3. Yeo, M., Lin, P.S., Dahmus, M.E. and Gill, G.N. (2003) A novel RNA polymerase II C-terminal domain phosphatase that preferentially dephosphorylates serine 5. J Biol Chem, 278, 26078-26085. PMID: 12721286
4. Yeo, M., Lee, S.K., Lee, B., Ruiz, E.C., Pfaff, S.L. and Gill, G.N. (2005) Small CTD phosphatases function in silencing neuronal gene expression. Science, 307, 596-600. PMID: 15681389


There are 15 genes.  Reviewed (0 or Unreviewed (15

No.StatusEKPD IDGene IDGene Name
1
EPS-HOV-00097
MLOC_17577
2
EPS-HOV-00105
MLOC_12432
3
EPS-HOV-00093
MLOC_16724
CPL1
4
EPS-HOV-00103
MLOC_5031
5
EPS-HOV-00101
MLOC_3482
6
EPS-HOV-00102
MLOC_59943
7
EPS-HOV-00095
MLOC_64614
8
EPS-HOV-00091
MLOC_50957
9
EPS-HOV-00092
MLOC_18132
10
EPS-HOV-00100
MLOC_55361
11
EPS-HOV-00098
MLOC_12816
12
EPS-HOV-00096
MLOC_37670
13
EPS-HOV-00104
MLOC_71419
14
EPS-HOV-00094
MLOC_2848
15
EPS-HOV-00099
MLOC_55530