Musa acuminata      Asp-Based PTP      FCP

※ FCP family introduction

    FCP/SCP phosphatase belongs to a family of phosphatase which uses an Asp nucleophile for catalysis. FCP/SCP is characterized by its phosphatase activity towards the CTD of the largest subunit of RNA polymerase II (1). At least seven members have been identified in human genome and FCP/SCP phosphatases share a conserved catalytic signature, which is known as DXDXT/V (2). Family member FCP1 is conserved among all eukaryotes and plays a important role in cell survival in budding and fission yeasts. SCP1 preferentially dephosphorylate Ser5 in CTD domain of RNA polymerase II and play a role in the regulation of gene expression by controlling the transition from initiation/capping to processive transcript elongation (3). In addition, SCP1 also act as a key regulator that functions in silencing neuronal gene expression (4).

Reference
1. Shi, Y. (2009) Serine/threonine phosphatases: mechanism through structure. Cell, 139, 468-484. PMID: 19879837
2. Moorhead, G.B., Trinkle-Mulcahy, L. and Ulke-Lemee, A. (2007) Emerging roles of nuclear protein phosphatases. Nat Rev Mol Cell Biol, 8, 234-244. PMID: 17318227
3. Yeo, M., Lin, P.S., Dahmus, M.E. and Gill, G.N. (2003) A novel RNA polymerase II C-terminal domain phosphatase that preferentially dephosphorylates serine 5. J Biol Chem, 278, 26078-26085. PMID: 12721286
4. Yeo, M., Lee, S.K., Lee, B., Ruiz, E.C., Pfaff, S.L. and Gill, G.N. (2005) Small CTD phosphatases function in silencing neuronal gene expression. Science, 307, 596-600. PMID: 15681389


There are 18 genes.  Reviewed (0 or Unreviewed (18

No.StatusEKPD IDGene IDGene Name
1
EPS-MUA-00170
GSMUA_Achr11G10900_001
2
EPS-MUA-00175
GSMUA_AchrUn_randomG01510_001
3
EPS-MUA-00182
GSMUA_Achr7G27160_001
4
EPS-MUA-00187
GSMUA_Achr9G18670_001
5
EPS-MUA-00176
GSMUA_Achr3G13710_001
6
EPS-MUA-00173
GSMUA_Achr4G14980_001
7
EPS-MUA-00184
GSMUA_AchrUn_randomG10720_001
8
EPS-MUA-00183
GSMUA_Achr10G12030_001
9
EPS-MUA-00186
GSMUA_Achr4G32870_001
10
EPS-MUA-00178
GSMUA_Achr9G26640_001
11
EPS-MUA-00171
GSMUA_Achr3G31200_001
12
EPS-MUA-00177
GSMUA_Achr10G08200_001
13
EPS-MUA-00181
GSMUA_Achr5G25960_001
14
EPS-MUA-00172
GSMUA_Achr8G27120_001
15
EPS-MUA-00179
GSMUA_Achr9G04410_001
16
EPS-MUA-00174
GSMUA_Achr7G13810_001
17
EPS-MUA-00185
GSMUA_Achr6G08030_001
18
EPS-MUA-00180
GSMUA_Achr7G27270_001