Oryctolagus cuniculus      Asp-Based PTP      FCP

※ FCP family introduction

    FCP/SCP phosphatase belongs to a family of phosphatase which uses an Asp nucleophile for catalysis. FCP/SCP is characterized by its phosphatase activity towards the CTD of the largest subunit of RNA polymerase II (1). At least seven members have been identified in human genome and FCP/SCP phosphatases share a conserved catalytic signature, which is known as DXDXT/V (2). Family member FCP1 is conserved among all eukaryotes and plays a important role in cell survival in budding and fission yeasts. SCP1 preferentially dephosphorylate Ser5 in CTD domain of RNA polymerase II and play a role in the regulation of gene expression by controlling the transition from initiation/capping to processive transcript elongation (3). In addition, SCP1 also act as a key regulator that functions in silencing neuronal gene expression (4).

Reference
1. Shi, Y. (2009) Serine/threonine phosphatases: mechanism through structure. Cell, 139, 468-484. PMID: 19879837
2. Moorhead, G.B., Trinkle-Mulcahy, L. and Ulke-Lemee, A. (2007) Emerging roles of nuclear protein phosphatases. Nat Rev Mol Cell Biol, 8, 234-244. PMID: 17318227
3. Yeo, M., Lin, P.S., Dahmus, M.E. and Gill, G.N. (2003) A novel RNA polymerase II C-terminal domain phosphatase that preferentially dephosphorylates serine 5. J Biol Chem, 278, 26078-26085. PMID: 12721286
4. Yeo, M., Lee, S.K., Lee, B., Ruiz, E.C., Pfaff, S.L. and Gill, G.N. (2005) Small CTD phosphatases function in silencing neuronal gene expression. Science, 307, 596-600. PMID: 15681389


There are 9 genes.  Reviewed (0 or Unreviewed (9

No.StatusEKPD IDGene IDGene Name
1
EPS-ORC-00064
ENSOCUG00000016574
CTDSP1
2
EPS-ORC-00069
ENSOCUG00000012940
3
EPS-ORC-00068
ENSOCUG00000003879
CTDP1
4
EPS-ORC-00063
ENSOCUG00000012533
LOC100341986
5
EPS-ORC-00062
ENSOCUG00000027494
CTDNEP1
6
EPS-ORC-00067
ENSOCUG00000017811
CTDSP2
7
EPS-ORC-00061
ENSOCUG00000005366
CTDSPL2
8
EPS-ORC-00065
ENSOCUG00000002166
TIMM50
9
EPS-ORC-00066
ENSOCUG00000002224
UBLCP1