Petromyzon marinus      Asp-Based PTP      FCP

※ FCP family introduction

    FCP/SCP phosphatase belongs to a family of phosphatase which uses an Asp nucleophile for catalysis. FCP/SCP is characterized by its phosphatase activity towards the CTD of the largest subunit of RNA polymerase II (1). At least seven members have been identified in human genome and FCP/SCP phosphatases share a conserved catalytic signature, which is known as DXDXT/V (2). Family member FCP1 is conserved among all eukaryotes and plays a important role in cell survival in budding and fission yeasts. SCP1 preferentially dephosphorylate Ser5 in CTD domain of RNA polymerase II and play a role in the regulation of gene expression by controlling the transition from initiation/capping to processive transcript elongation (3). In addition, SCP1 also act as a key regulator that functions in silencing neuronal gene expression (4).

Reference
1. Shi, Y. (2009) Serine/threonine phosphatases: mechanism through structure. Cell, 139, 468-484. PMID: 19879837
2. Moorhead, G.B., Trinkle-Mulcahy, L. and Ulke-Lemee, A. (2007) Emerging roles of nuclear protein phosphatases. Nat Rev Mol Cell Biol, 8, 234-244. PMID: 17318227
3. Yeo, M., Lin, P.S., Dahmus, M.E. and Gill, G.N. (2003) A novel RNA polymerase II C-terminal domain phosphatase that preferentially dephosphorylates serine 5. J Biol Chem, 278, 26078-26085. PMID: 12721286
4. Yeo, M., Lee, S.K., Lee, B., Ruiz, E.C., Pfaff, S.L. and Gill, G.N. (2005) Small CTD phosphatases function in silencing neuronal gene expression. Science, 307, 596-600. PMID: 15681389


There are 9 genes.  Reviewed (0 or Unreviewed (9

No.StatusEKPD IDGene IDGene Name
1
EPS-PEM-00050
ENSPMAG00000003994
TIMM50
2
EPS-PEM-00046
ENSPMAG00000000998
CTDSPL2 (2 of 3)
3
EPS-PEM-00047
ENSPMAG00000009544
CTDSPL
4
EPS-PEM-00051
ENSPMAG00000008480
CTDSPL2 (3 of 3)
5
EPS-PEM-00052
ENSPMAG00000005431
CTDP1
6
EPS-PEM-00045
ENSPMAG00000009781
CTDSPL2 (1 of 3)
7
EPS-PEM-00053
ENSPMAG00000008382
CTDNEP1
8
EPS-PEM-00049
ENSPMAG00000005326
CTDSP1
9
EPS-PEM-00048
ENSPMAG00000003567
CTDSP2