Zea mays      Asp-Based PTP      FCP

※ FCP family introduction

    FCP/SCP phosphatase belongs to a family of phosphatase which uses an Asp nucleophile for catalysis. FCP/SCP is characterized by its phosphatase activity towards the CTD of the largest subunit of RNA polymerase II (1). At least seven members have been identified in human genome and FCP/SCP phosphatases share a conserved catalytic signature, which is known as DXDXT/V (2). Family member FCP1 is conserved among all eukaryotes and plays a important role in cell survival in budding and fission yeasts. SCP1 preferentially dephosphorylate Ser5 in CTD domain of RNA polymerase II and play a role in the regulation of gene expression by controlling the transition from initiation/capping to processive transcript elongation (3). In addition, SCP1 also act as a key regulator that functions in silencing neuronal gene expression (4).

Reference
1. Shi, Y. (2009) Serine/threonine phosphatases: mechanism through structure. Cell, 139, 468-484. PMID: 19879837
2. Moorhead, G.B., Trinkle-Mulcahy, L. and Ulke-Lemee, A. (2007) Emerging roles of nuclear protein phosphatases. Nat Rev Mol Cell Biol, 8, 234-244. PMID: 17318227
3. Yeo, M., Lin, P.S., Dahmus, M.E. and Gill, G.N. (2003) A novel RNA polymerase II C-terminal domain phosphatase that preferentially dephosphorylates serine 5. J Biol Chem, 278, 26078-26085. PMID: 12721286
4. Yeo, M., Lee, S.K., Lee, B., Ruiz, E.C., Pfaff, S.L. and Gill, G.N. (2005) Small CTD phosphatases function in silencing neuronal gene expression. Science, 307, 596-600. PMID: 15681389


There are 22 genes.  Reviewed (0 or Unreviewed (22

No.StatusEKPD IDGene IDGene Name
1
EPS-ZEM-00174
GRMZM5G896568
2
EPS-ZEM-00190
GRMZM2G039650
3
EPS-ZEM-00180
GRMZM2G114172
4
EPS-ZEM-00185
GRMZM2G360688
5
EPS-ZEM-00169
GRMZM2G162347
6
EPS-ZEM-00171
GRMZM2G347623
7
EPS-ZEM-00181
AC186287.7_FG005
8
EPS-ZEM-00176
GRMZM2G066755
9
EPS-ZEM-00175
GRMZM2G173542
10
EPS-ZEM-00186
GRMZM2G097481
11
EPS-ZEM-00184
GRMZM2G347995
12
EPS-ZEM-00178
GRMZM2G441091
13
EPS-ZEM-00188
GRMZM2G012998
14
EPS-ZEM-00187
GRMZM2G031257
15
EPS-ZEM-00182
GRMZM2G406712
16
EPS-ZEM-00179
GRMZM2G090262
17
EPS-ZEM-00170
GRMZM2G068690
18
EPS-ZEM-00173
GRMZM2G124179
19
EPS-ZEM-00177
GRMZM2G035651
20
EPS-ZEM-00189
GRMZM2G068091
21
EPS-ZEM-00183
GRMZM2G072231
22
EPS-ZEM-00172
GRMZM2G122362