Populus trichocarpa      CAMK      CAMKL

※ CAMKL family introduction

    CAMKL family consists of several subfamily including SNRK, QIK, BRSK, AMPK, MARK, NuaK, NIM1, HUNK, LKB, PASK, MELK and CHK1. They are classified into CAMKL family for the high similarity kinase catalytic domain.
AMPK subfamily (AMP-activated protein kinase) consists of three subunits, a catalytic subunit (α) and two regulatory subunits (β and γ). Two catalytic subunits have been identified in mammals. Activation of AMPK is involved in two steps; first, AMP binds to γ-subunit, and second the phosphorylation of threonine 172 by LKB1. Activated AMPK target a variety of substrates and participate different cellular processes, including mTORC1 signaling, phosphorylation of p53 or other tumor suppressors (1).
MARK subfamily (microtubule-affinity regulating kinases) consists of four members (MARK1-MARK4) in mammals cells. All isoforms contain a N-terminal header, a catalytic kinase domain, a ubiquitin-associated domain, a spacer domain and a C-terminal KA1 domain. MARKs are discovered for its ability to regulate the stability of microtubules. Studies also show that MARK has some relation with disease, such as Alzheimer's disease (2).
Nuak subfamilies are AMPK related kinases. NuaK1 are stress-activated kinase which is involved in tolerance to glucose starvation. NuaK1 can induce cell-cell detachment by increasing F-actin conversion to G-actin. NuaK1 can protects cells from CD95-mediated apoptosis and is required for the increased motility and invasiveness of CD95- activated tumor cells (3).

Reference
1. Luo, Z., Zang, M. and Guo, W. (2010) AMPK as a metabolic tumor suppressor: control of metabolism and cell growth. Future Oncol, 6, 457-470. PMID: 20222801
2. Matenia, D. and Mandelkow, E.M. (2009) The tau of MARK: a polarized view of the cytoskeleton. Trends Biochem Sci, 34, 332-342. PMID: 19559622
3. Suzuki, A., Kusakai, G., Kishimoto, A., Minegichi, Y., Ogura, T. and Esumi, H. (2003) Induction of cell-cell detachment during glucose starvation through F-actin conversion by SNARK, the fourth member of the AMP-activated protein kinase catalytic subunit family. Biochem Biophys Res Commun, 311, 156-161. PMID: 14575707


There are 43 genes.  Reviewed (0 or Unreviewed (43

No.StatusEKPD IDGene IDGene Name
1
EKS-POT-00884
POPTR_0006s20030
POPTRDRAFT_669608, POPTRDRAFT_681270; CIPK8; CIPK7
2
EKS-POT-00888
POPTR_0007s05080
POPTRDRAFT_832255
3
EKS-POT-00886
POPTR_0003s01110
4
EKS-POT-00872
POPTR_0019s14810
POPTRDRAFT_739038; CIPK2
5
EKS-POT-00874
POPTR_0019s14860
CIPK15; POPTRDRAFT_574497
6
EKS-POT-00862
POPTR_0010s00490
POPTRDRAFT_821684; CIPK1
7
EKS-POT-00856
POPTR_0017s12380
POPTRDRAFT_577688
8
EKS-POT-00895
POPTR_0004s14540
POPTRDRAFT_837198
9
EKS-POT-00883
POPTR_0010s08950
CIPK10; POPTRDRAFT_566160
10
EKS-POT-00877
POPTR_0018s10450
POPTRDRAFT_910907
11
EKS-POT-00881
POPTR_0003s18030
CIPK23
12
EKS-POT-00868
POPTR_0001s23030
POPTRDRAFT_672762; CIPK3
13
EKS-POT-00860
POPTR_0006s27940
POPTRDRAFT_717895; CIPK6
14
EKS-POT-00898
POPTR_0005s14100
15
EKS-POT-00896
POPTR_0003s21580
POPTRDRAFT_555254
16
EKS-POT-00879
POPTR_0019s07530
POPTRDRAFT_665387
17
EKS-POT-00864
POPTR_0025s00500
CIPK25
18
EKS-POT-00875
POPTR_0018s02460
CIPK20; POPTRDRAFT_825779
19
EKS-POT-00867
POPTR_0009s02610
POPTRDRAFT_650368; CIPK4
20
EKS-POT-00892
POPTR_0004s15270
POPTRDRAFT_827940
21
EKS-POT-00897
POPTR_0001s04790
POPTRDRAFT_639689
22
EKS-POT-00871
POPTR_0013s15200
CIPK14
23
EKS-POT-00870
POPTR_0013s15160
CIPK16
24
EKS-POT-00857
POPTR_0004s11500
POPTRDRAFT_818055
25
EKS-POT-00878
POPTR_0018s13050
POPTRDRAFT_736564; CIPK26
26
EKS-POT-00885
POPTR_0008s16010
POPTRDRAFT_803737; CIPK5
27
EKS-POT-00889
POPTR_0019s00790
POPTRDRAFT_665248
28
EKS-POT-00869
POPTR_0011s07230
CIPK17
29
EKS-POT-00880
POPTR_0011s07240
CIPK11; POPTRDRAFT_660765
30
EKS-POT-00894
POPTR_0002s17840
31
EKS-POT-00882
POPTR_0006s06760
POPTRDRAFT_560599; CIPK27
32
EKS-POT-00887
POPTR_0004s22790
POPTRDRAFT_931343
33
EKS-POT-00859
POPTR_0006s06160
POPTRDRAFT_1117122; CIPK24
34
EKS-POT-00890
POPTR_0002s09990
POPTRDRAFT_754742
35
EKS-POT-00876
POPTR_0016s14140
CIPK21; POPTRDRAFT_577152
36
EKS-POT-00861
POPTR_0016s14100
CIPK22
37
EKS-POT-00893
POPTR_0009s11010
POPTRDRAFT_557335
38
EKS-POT-00866
POPTR_0006s18710
39
EKS-POT-00865
POPTR_0002s10970
POPTRDRAFT_711591
40
EKS-POT-00858
POPTR_0013s09420
POPTRDRAFT_895706
41
EKS-POT-00891
POPTR_0018s11770
42
EKS-POT-00873
POPTR_0004s05700
CIPK19
43
EKS-POT-00863
POPTR_0014s10000
POPTRDRAFT_824057; CIPK13; CIPK12