Vitis vinifera      CAMK      CAMKL

※ CAMKL family introduction

    CAMKL family consists of several subfamily including SNRK, QIK, BRSK, AMPK, MARK, NuaK, NIM1, HUNK, LKB, PASK, MELK and CHK1. They are classified into CAMKL family for the high similarity kinase catalytic domain.
AMPK subfamily (AMP-activated protein kinase) consists of three subunits, a catalytic subunit (α) and two regulatory subunits (β and γ). Two catalytic subunits have been identified in mammals. Activation of AMPK is involved in two steps; first, AMP binds to γ-subunit, and second the phosphorylation of threonine 172 by LKB1. Activated AMPK target a variety of substrates and participate different cellular processes, including mTORC1 signaling, phosphorylation of p53 or other tumor suppressors (1).
MARK subfamily (microtubule-affinity regulating kinases) consists of four members (MARK1-MARK4) in mammals cells. All isoforms contain a N-terminal header, a catalytic kinase domain, a ubiquitin-associated domain, a spacer domain and a C-terminal KA1 domain. MARKs are discovered for its ability to regulate the stability of microtubules. Studies also show that MARK has some relation with disease, such as Alzheimer's disease (2).
Nuak subfamilies are AMPK related kinases. NuaK1 are stress-activated kinase which is involved in tolerance to glucose starvation. NuaK1 can induce cell-cell detachment by increasing F-actin conversion to G-actin. NuaK1 can protects cells from CD95-mediated apoptosis and is required for the increased motility and invasiveness of CD95- activated tumor cells (3).

Reference
1. Luo, Z., Zang, M. and Guo, W. (2010) AMPK as a metabolic tumor suppressor: control of metabolism and cell growth. Future Oncol, 6, 457-470. PMID: 20222801
2. Matenia, D. and Mandelkow, E.M. (2009) The tau of MARK: a polarized view of the cytoskeleton. Trends Biochem Sci, 34, 332-342. PMID: 19559622
3. Suzuki, A., Kusakai, G., Kishimoto, A., Minegichi, Y., Ogura, T. and Esumi, H. (2003) Induction of cell-cell detachment during glucose starvation through F-actin conversion by SNARK, the fourth member of the AMP-activated protein kinase catalytic subunit family. Biochem Biophys Res Commun, 311, 156-161. PMID: 14575707


There are 28 genes.  Reviewed (0 or Unreviewed (28

No.StatusEKPD IDGene IDGene Name
1
EKS-VIV-00580
Vv18s0001g07980
VIT_18s0001g07980; CIPK17
2
EKS-VIV-00600
Vv16s0022g00350
VIT_16s0022g00350
3
EKS-VIV-00593
Vv12s0035g00310
VITISV_028464
4
EKS-VIV-00576
Vv06s0009g01840
VITISV_010092; CIPK018
5
EKS-VIV-00585
Vv04s0008g05770
VIT_04s0008g05770
6
EKS-VIV-00586
Vv13s0067g02480
VIT_13s0067g02480; CIPK13
7
EKS-VIV-00596
Vv00s0710g00020
VIT_00s0710g00020
8
EKS-VIV-00579
Vv11s0052g01700
VIT_11s0052g01700; CIPK14
9
EKS-VIV-00577
Vv08s0058g01040
CIPK07; VIT_08s0058g01040; VITISV_040419
10
EKS-VIV-00588
Vv08s0058g01090
CIPK08; VIT_08s0058g01090
11
EKS-VIV-00594
Vv05s0020g00830
CIPK19
12
EKS-VIV-00574
Vv08s0040g00720
VIT_08s0040g00720
13
EKS-VIV-00595
Vv07s0031g03210
VIT_07s0031g03210
14
EKS-VIV-00599
Vv06s0004g02990
VITISV_016074
15
EKS-VIV-00573
Vv14s0108g01230
VIT_14s0108g01230
16
EKS-VIV-00582
Vv06s0004g07830
VIT_06s0004g07830; CIPK11
17
EKS-VIV-00589
Vv06s0004g07870
VIT_06s0004g07870; CIPK10
18
EKS-VIV-00578
Vv15s0048g02740
CIPK12; VIT_15s0048g02740
19
EKS-VIV-00592
Vv05s0020g04570
CIPK20; VIT_05s0020g04570
20
EKS-VIV-00583
Vv10s0003g01420
VIT_10s0003g01420; CIPK01
21
EKS-VIV-00587
Vv10s0003g01410
VIT_10s0003g01410; CIPK16
22
EKS-VIV-00591
Vv11s0016g00200
VITISV_026919; VIT_11s0016g00200; CIPK03
23
EKS-VIV-00598
Vv06s0004g01140
VIT_06s0004g01140
24
EKS-VIV-00590
Vv09s0070g00160
VITISV_025694; CIPK05
25
EKS-VIV-00584
Vv09s0070g00140
VIT_09s0070g00140
26
EKS-VIV-00597
Vv07s0197g00080
VIT_07s0197g00080
27
EKS-VIV-00575
Vv10s0003g04020
VITISV_034332; CIPK04
28
EKS-VIV-00581
Vv11s0016g05420
VITISV_043742; CIPK09