EKS-SAC-00131
Eukaryotic Protein Kinase & Protein Phosphatase Database
TagContent
EKPD IDEKS-SAC-00131
Classification
Group/FamilyScoreE-ValueStartEndDomain Length
Atypical/BRDN/AN/AN/AN/AN/A
StatusReviewed
Ensembl ProteinYLR399C
UniProt AccessionP35817; D6VZ34; Q06048;
Protein NameBromodomain-containing factor 1
Protein Synonyms/Alias
Gene NameBDF1
Gene Synonyms/Alias BDF1; YLR399C; L8084.18;
Ensembl Information
Ensembl Gene IDEnsembl Protein IDEnsembl Transcript ID
YLR399CYLR399CYLR399C
OrganismSaccharomyces cerevisiae
Functional DescriptionTranscription factor involved in the expression of abroad class of genes including snRNAs. Required for sporulation and DNA-damage repair. Prevents the spreading of SIR silencing at telomeres and protects histone H4, but not H3, from deacetylation.
Protein Length686
Protein Sequence
(FASTA)
MTDITPVQND VDVNGNNVND DVSSNLKRPI DQGDPSNGLA EEENPANNQL HLKKARLDGD 60
ALTSSPAGLA ENGIEGATLA ANGENGYNAT GSGAEDEQQG LKKEEGGQGT KQEDLDENSK 120
QELPMEVPKE PAPAPPPEPD MNNLPQNPIP KHQQKHALLA IKAVKRLKDA RPFLQPVDPV 180
KLDIPFYFNY IKRPMDLSTI ERKLNVGAYE VPEQITEDFN LMVNNSIKFN GPNAGISQMA 240
RNIQASFEKH MLNMPAKDAP PVIAKGRRSS AQEDAPIVIR RAQTHNGRPK RTIHPPKSKD 300
IYPYESKKPK SKRLQQAMKF CQSVLKELMA KKHASYNYPF LEPVDPVSMN LPTYFDYVKE 360
PMDLGTIAKK LNDWQYQTME DFERDVRLVF KNCYTFNPDG TIVNMMGHRL EEVFNSKWAD 420
RPNLDDYDSD EDSRTQGDYD DYESEYSESD IDETIITNPA IQYLEEQLAR MKVELQQLKK 480
QELEKIRKER RLARGSKKRG KRSKGRSGSK NASSKGRRDK KNKLKTVVTY DMKRIITERI 540
NDLPTSKLER AIDIIKKSMP NISEDDEVEL DLDTLDNHTI LTLYNTFFRQ YESSSGASNG 600
LDGTSGVTRD ASSLSPTSAG SRKRRSKALS QEEQSRQIEK IKNKLAILDS ASPLSQNGSP 660
GQIQSAAHNG FSSSSDDDVS SESEEE 686
Nucleotide Sequence
(FASTA)
ATGACCGATA TCACACCCGT ACAGAACGAT GTGGATGTCA ATGGTAATAA TGTCAATGAC 60
GACGTTTCCA GTAATCTAAA GAGGCCTATA GATCAAGGGG ATCCTTCGAA TGGACTCGCA 120
GAAGAAGAAA ACCCCGCCAA TAACCAGTTG CATCTCAAAA AGGCTAGACT GGATGGAGAT 180
GCTCTAACAT CATCGCCTGC TGGACTTGCA GAGAACGGTA TTGAAGGCGC CACCCTGGCG 240
GCTAACGGGG AAAATGGGTA TAACGCCACC GGAAGTGGCG CAGAAGACGA ACAGCAGGGG 300
TTGAAGAAGG AAGAAGGAGG ACAAGGTACC AAACAAGAGG ATTTAGATGA AAACTCAAAA 360
CAAGAACTTC CGATGGAGGT TCCAAAGGAA CCTGCCCCTG CTCCTCCTCC AGAGCCCGAT 420
ATGAATAATC TCCCTCAGAA TCCAATACCA AAGCACCAGC AGAAACATGC ATTGCTTGCG 480
ATTAAAGCTG TCAAACGCTT GAAGGATGCG AGACCCTTTC TACAACCTGT TGACCCAGTG 540
AAATTGGATA TTCCCTTTTA CTTTAACTAC ATAAAGAGGC CAATGGACTT GTCTACTATA 600
GAGAGGAAGT TGAACGTAGG CGCTTATGAA GTTCCGGAGC AAATCACGGA GGATTTCAAT 660
CTCATGGTTA ACAACAGTAT TAAATTCAAC GGTCCAAATG CGGGCATATC ACAAATGGCA 720
AGAAACATAC AAGCTTCTTT CGAGAAACAT ATGCTAAATA TGCCTGCTAA GGATGCTCCA 780
CCTGTAATAG CCAAGGGACG GCGGTCTAGT GCCCAAGAGG ATGCCCCAAT TGTAATTAGA 840
CGAGCCCAAA CTCATAATGG GAGGCCGAAA AGGACTATAC ATCCGCCGAA ATCAAAGGAT 900
ATTTATCCTT ATGAATCGAA GAAACCGAAA TCCAAAAGAC TACAACAAGC AATGAAATTT 960
TGTCAGAGTG TGCTAAAGGA ATTGATGGCC AAGAAGCACG CCTCTTATAA CTACCCATTT 1020
TTGGAACCAG TAGACCCAGT TTCTATGAAT TTGCCGACTT ATTTCGATTA TGTTAAAGAG 1080
CCAATGGATT TAGGCACAAT CGCCAAGAAA TTAAATGACT GGCAGTATCA AACAATGGAG 1140
GATTTTGAGA GAGACGTGAG GTTGGTCTTT AAAAACTGCT ACACGTTCAA TCCGGATGGC 1200
ACGATCGTTA ATATGATGGG TCATCGTCTA GAGGAAGTTT TCAATTCCAA ATGGGCGGAT 1260
AGGCCTAATT TGGATGACTA CGATTCCGAT GAAGATTCGA GGACCCAAGG CGACTACGAC 1320
GATTATGAAT CTGAGTATTC AGAGTCTGAC ATCGATGAAA CTATAATTAC AAATCCAGCC 1380
ATCCAGTATT TGGAAGAACA ACTTGCTCGG ATGAAAGTGG AGTTGCAACA ATTAAAAAAG 1440
CAAGAACTGG AAAAAATAAG AAAAGAGAGG CGCTTAGCAC GTGGATCAAA GAAACGCGGC 1500
AAAAGATCGA AGGGAAGGAG TGGGTCTAAG AACGCTTCTT CGAAAGGAAG GCGAGATAAA 1560
AAGAATAAAT TGAAAACAGT AGTGACATAT GATATGAAAC GTATCATTAC AGAGAGGATC 1620
AATGATTTAC CAACTTCCAA ATTAGAAAGA GCAATCGACA TAATAAAAAA ATCCATGCCC 1680
AATATTTCTG AAGACGATGA AGTAGAACTT GACCTCGACA CTTTAGATAA TCACACCATC 1740
TTAACATTGT ACAACACTTT CTTTAGACAA TATGAAAGCT CATCCGGTGC TTCTAACGGT 1800
TTGGACGGTA CTTCAGGTGT TACGCGAGAT GCTTCGTCCT TGTCGCCTAC AAGTGCGGGA 1860
AGCAGAAAGA GAAGATCTAA GGCATTAAGC CAAGAGGAGC AGAGTAGGCA GATAGAAAAG 1920
ATAAAAAATA AACTAGCTAT CTTAGACAGT GCTTCACCTC TGAGCCAAAA CGGCTCCCCA 1980
GGCCAAATTC AAAGCGCTGC ACACAACGGG TTTTCCTCAT CTTCAGATGA CGATGTTAGC 2040
AGCGAAAGTG AAGAAGAGTG A 2061
Domain Profile
N/A
Domain Sequence
(FASTA)
N/A
KeywordBromodomain; Coiled coil; Complete proteome; DNA damage; DNA repair; Nucleus; Phosphoprotein; Reference proteome; Repeat; Sporulation; Transcription; Transcription regulation.
Sequence SourceEnsembl
Orthology
Ortholog group
Ailuropoda melanoleuca"; ?>Anolis carolinensis"; ?>Bos taurus"; ?>Caenorhabditis elegans"; ?>Callithrix jacchus"; ?>Canis familiaris"; ?>Cavia porcellus"; ?>Ciona intestinalis"; ?>Danio rerio"; ?>Dipodomys ordii"; ?>Echinops telfairi"; ?>Equus caballus"; ?>Erinaceus europaeus"; ?>Gadus morhua"; ?>Gallus gallus"; ?>Gasterosteus aculeatus"; ?>Gorilla gorilla"; ?>Homo sapiens"; ?>Ictidomys tridecemlineatus"; ?>Latimeria chalumnae"; ?>Loxodonta africana"; ?>Macaca mulatta"; ?>Meleagris gallopavo"; ?>Monodelphis domestica"; ?>Mus musculus"; ?>Mustela putorius furo"; ?>Myotis lucifugus"; ?>Nomascus leucogenys"; ?>Ornithorhynchus anatinus"; ?>Oryctolagus cuniculus"; ?>Otolemur garnettii"; ?>Pan troglodytes"; ?>Pelodiscus sinensis"; ?>Pongo abelii"; ?>Rattus norvegicus"; ?>Sarcophilus harrisii"; ?>Sorex araneus"; ?>Sus scrofa"; ?>Taeniopygia guttata"; ?>Takifugu rubripes"; ?>Tetraodon nigroviridis"; ?>Tursiops truncatus"; ?>Xenopus tropicalis"; ?>Xiphophorus maculatus"; ?>Schizosaccharomyces pombe"; ?>
EKS-AIM-00464
EKS-ANC-00485
EKS-BOT-00497
EKS-CAE-00440
EKS-CAJ-00509
EKS-CAF-00504
EKS-CAP-00531
EKS-CII-00277
EKS-DAR-00928
EKS-DIO-00119
EKS-ECT-00084
EKS-EQC-00490
EKS-ERE-00066
EKS-GAM-00301
EKS-GAG-00412
EKS-GAA-00602
EKS-GOG-00485
EKS-HOS-00510
EKS-ICT-00480
EKS-LAC-00516
EKS-LOA-00510
EKS-MAM-00501
EKS-MEG-00408
EKS-MOD-00488
EKS-MUM-00526
EKS-MUP-00489
EKS-MYL-00488
EKS-NOL-00449
EKS-ORA-00435
EKS-ORC-00476
EKS-OTG-00506
EKS-PAT-00474
EKS-PES-00442
EKS-POA-00481
EKS-RAN-00516
EKS-SAH-00471
EKS-SOA-00068
EKS-SUS-00436
EKS-TAG-00562
EKS-TAR-00620
EKS-TEN-00629
EKS-TUT-00206
EKS-XET-00649
EKS-XIM-00625
EKS-SCP-00125
Gene Ontology
GO:0000812; C:Swr1 complex
GO:0003682; F:chromatin binding
GO:0001047; F:core promoter binding
GO:0070577; F:histone acetyl-lysine binding
GO:0001094; F:TFIID-class transcription factor binding
GO:0006338; P:chromatin remodeling
GO:0006281; P:DNA repair
GO:0031452; P:negative regulation of heterochromatin assembly
GO:1900051; P:positive regulation of histone exchange
GO:0090054; P:regulation of chromatin silencing at silent mating-type cassette
GO:0031938; P:regulation of chromatin silencing at telomere
GO:0034401; P:regulation of transcription by chromatin organization
GO:0009301; P:snRNA transcription
GO:0030435; P:sporulation resulting in formation of a cellular spore
KEGG
sce:YLR399C;
InterPros
IPR001487; Bromodomain.
IPR018359; Bromodomain_CS.
Pfam
PF00439; Bromodomain; 2.
SMARTs
SM00297; BROMO; 2.
Prosites
PS00633; BROMODOMAIN_1; 2.
PS50014; BROMODOMAIN_2; 2.
PS51525; NET; 1.
Prints
PR00503; BROMODOMAIN.
Created Date20-Feb-2013