EKS-ART-00606
Eukaryotic Protein Kinase & Protein Phosphatase Database
TagContent
EKPD IDEKS-ART-00606
Classification
Group/FamilyScoreE-ValueStartEndDomain Length
CMGC/CDK360.78.8E-10812292281
StatusReviewed
Ensembl ProteinAT1G18040.1
UniProt AccessionQ9LMT0; Q9LM42;
Protein NameCyclin-dependent kinase D-3
Protein Synonyms/Alias CDKD; CDK-activating kinase 2-At; CAK2-At;
Gene NameCDKD-3
Gene Synonyms/Alias CDKD-3; At1g18040; T10F20.5, T10O22.1;
Ensembl Information
Ensembl Gene IDEnsembl Protein IDEnsembl Transcript ID
AT1G18040AT1G18040.1AT1G18040.1
OrganismArabidopsis thaliana
Functional DescriptionMay form a stable complex with cyclin CYCH1-1 thatphosphorylates human CDK2 and the C-terminal domain (CTD) of the large subunit of RNA polymerase II.
Protein Length391
Protein Sequence
(FASTA)
MPEQPKKVAD RYLKQEVLGQ GTYGVVFKAT DTKTEQTVAI KKIRLGKQRE GVNITALREI 60
KMLKELKHPH IILLIDAFPH KENLHLVFEF METDLEAVIR DSNIFLSPAD IKSYLLMTFK 120
GLAYCHDKWV LHRDMKPNNL LIGVDGQLKL ADFGLARIFG SPNRKFTHQV FARWYRAPEL 180
LFGAKQYGAA VDVWAVACIF AELLLRRPFL QGNSDIDQLS KIFAAFGTPK ADQWPDLTKL 240
PDYVEYQFVP APSLRSLFPA VSDDALDLLS KMFTYDPKAR ISIKQALEHR YFTSAPAPTD 300
PAKLPKPVPK QDGKSSYGKH EAITVQSPPR KLRRVMPERG RVDSLKSHVD KDQQAPMSLD 360
FTILAERPPN RPTITSADRS HLKRKLDLEF Q 391
Nucleotide Sequence
(FASTA)
ATGCCGGAGC AGCCAAAGAA AGTTGCTGAT AGGTATCTCA AGCAAGAGGT TCTTGGGCAA 60
GGTACCTATG GAGTCGTCTT CAAAGCCACT GATACTAAGA CGGAACAAAC TGTAGCAATT 120
AAGAAGATAA GGCTTGGTAA ACAAAGAGAA GGTGTAAATA TTACAGCTCT CAGAGAAATC 180
AAAATGCTCA AAGAGCTAAA GCATCCTCAT ATTATTCTGC TCATTGATGC ATTTCCTCAC 240
AAGGAAAACT TGCATCTTGT CTTTGAGTTC ATGGAGACTG ACCTCGAAGC AGTTATTCGC 300
GATTCTAACA TTTTCCTCTC ACCCGCCGAC ATTAAATCCT ACCTCCTAAT GACATTTAAA 360
GGACTTGCTT ATTGCCACGA TAAATGGGTT TTGCACAGGG ATATGAAGCC AAATAACTTG 420
TTAATAGGAG TTGATGGACA GCTTAAGCTT GCAGATTTTG GCTTAGCACG TATATTTGGT 480
AGTCCAAATC GTAAGTTTAC CCACCAGGTG TTTGCTAGAT GGTACAGAGC ACCAGAACTT 540
TTGTTTGGTG CAAAACAATA TGGTGCTGCA GTTGATGTTT GGGCCGTTGC CTGCATATTC 600
GCCGAACTTC TACTACGCAG ACCATTTCTT CAGGGAAACA GTGATATTGA TCAATTAAGC 660
AAAATATTTG CTGCTTTTGG GACACCAAAA GCAGATCAGT GGCCGGATTT AACAAAGCTT 720
CCAGATTATG TAGAGTATCA ATTTGTCCCT GCACCGTCTC TACGTTCTTT ATTCCCAGCA 780
GTTAGTGATG ATGCTCTCGA CTTGTTGTCC AAAATGTTTA CCTATGACCC AAAGGCTAGA 840
ATTTCCATTA AGCAGGCTCT AGAACACAGG TACTTCACTT CTGCACCTGC TCCTACTGAC 900
CCGGCTAAGC TCCCAAAGCC CGTTCCTAAG CAGGATGGTA AATCATCTTA CGGTAAACAT 960
GAGGCCATTA CAGTGCAATC ACCACCACGT AAGCTTAGAA GAGTGATGCC TGAGCGTGGG 1020
AGGGTTGATA GTTTGAAGTC TCATGTTGAC AAGGATCAAC AAGCACCCAT GTCATTAGAT 1080
TTTACCATCC TCGCTGAGCG ACCTCCAAAC AGGCCAACAA TCACCAGTGC TGATAGATCT 1140
CATCTGAAGA GGAAACTCGA TCTTGAGTTC CAGTAA 1176
Domain Profile
S: 1     yeklekigeGtygkvykakdketgevvAlKkirlekekegvpitalrEisllkelkhkni  60
         y k e +g+Gtyg+v+ka+d++t+++vA+Kkirl k++egv+italrEi++lkelkh++i
Q: 12    YLKQEVLGQGTYGVVFKATDTKTEQTVAIKKIRLGKQREGVNITALREIKMLKELKHPHI  71
         667889******************************************************
S: 61    vkLlevvakdkkklyLvfefleqdLkkllkkkkkkklsleevkslllqlleglaylHsnk  120
         + L++ +  +k++l+Lvfef+e+dL+ +++++++  ls++++ks+ll+ ++glay+H+++
Q: 72    ILLIDAFP-HKENLHLVFEFMETDLEAVIRDSNI-FLSPADIKSYLLMTFKGLAYCHDKW  129
         ********.99***********************.*************************
S: 121   ilHRDlKpqNlLiskegklklaDfGlarafssplktytkevvTlwYraPelLlgakeYst  180
         +lHRD+Kp+NlLi  +g+lklaDfGlar f+sp++++t++v  +wYraPelL+gak+Y+ 
Q: 130   VLHRDMKPNNLLIGVDGQLKLADFGLARIFGSPNRKFTHQVFARWYRAPELLFGAKQYGA  189
         ************************************************************
S: 181   avDiWsvgcilaelltrkplfqgkseidqlerifkllgtpsekvwpevsklpeykksfpk  240
         avD+W+v ci+aell r+p++qg+s+idql++if+ +gtp+ ++wp+++klp+y  +++ 
Q: 190   AVDVWAVACIFAELLLRRPFLQGNSDIDQLSKIFAAFGTPKADQWPDLTKLPDYV-EYQF  248
         ******************************************************9.5555
S: 241   kkkkklkekvkklkekaldllekllaldpkkRisakealqhkyf  284
          ++ +l++ +++++++aldll+k++++dpk Ris k+al+h+yf
Q: 249   VPAPSLRSLFPAVSDDALDLLSKMFTYDPKARISIKQALEHRYF  292
         56789**************************************9
Domain Sequence
(FASTA)
YLKQEVLGQG TYGVVFKATD TKTEQTVAIK KIRLGKQREG VNITALREIK MLKELKHPHI 60
ILLIDAFPHK ENLHLVFEFM ETDLEAVIRD SNIFLSPADI KSYLLMTFKG LAYCHDKWVL 120
HRDMKPNNLL IGVDGQLKLA DFGLARIFGS PNRKFTHQVF ARWYRAPELL FGAKQYGAAV 180
DVWAVACIFA ELLLRRPFLQ GNSDIDQLSK IFAAFGTPKA DQWPDLTKLP DYVEYQFVPA 240
PSLRSLFPAV SDDALDLLSK MFTYDPKARI SIKQALEHRY F 281
KeywordATP-binding; Cell cycle; Cell division; Complete proteome; Kinase; Nucleotide-binding; Nucleus; Phosphoprotein; Reference proteome; Serine/threonine-protein kinase; Transferase.
Sequence SourceEnsembl
Orthology
Ortholog group
Arabidopsis lyrata"; ?>Brassica rapa"; ?>Cyanidioschyzon merolae"; ?>Oryza brachyantha"; ?>Oryza glaberrima"; ?>Oryza indica"; ?>Oryza sativa"; ?>Selaginella moellendorffii"; ?>Solanum lycopersicum"; ?>Solanum tuberosum"; ?>Vitis vinifera"; ?>Zea mays"; ?>
EKS-ARL-00589
EKS-BRR-01318
EKS-CYM-00044
EKS-ORB-00966
EKS-ORG-00956
EKS-ORI-01209
EKS-ORS-00786
EKS-SEM-00645
EKS-SOL-00600
EKS-SOT-00630
EKS-VIV-00683
EKS-ZEM-00812
Gene Ontology
GO:0005634; C:nucleus
GO:0005524; F:ATP binding
GO:0004693; F:cyclin-dependent protein kinase activity
GO:0004672; F:protein kinase activity
GO:0008353; F:RNA polymerase II carboxy-terminal domain kinase activity
GO:0051301; P:cell division
GO:0051726; P:regulation of cell cycle
KEGG
ath:AT1G18040;
InterPros
IPR011009; Kinase-like_dom.
IPR000719; Prot_kinase_cat_dom.
IPR017441; Protein_kinase_ATP_BS.
IPR002290; Ser/Thr_dual-sp_kinase_dom.
IPR008271; Ser/Thr_kinase_AS.
Pfam
PF00069; Pkinase; 1.
SMARTs
SM00220; S_TKc; 1.
Prosites
PS00107; PROTEIN_KINASE_ATP; 1.
PS50011; PROTEIN_KINASE_DOM; 1.
PS00108; PROTEIN_KINASE_ST; 1.
Prints
Created Date20-Feb-2013