Tag | Content |
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EKPD ID | EKS-ART-00606 |
Classification | Group/Family | Score | E-Value | Start | End | Domain Length |
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CMGC/CDK | 360.7 | 8.8E-108 | 12 | 292 | 281 |
|
Status | Reviewed |
Ensembl Protein | AT1G18040.1 |
UniProt Accession | Q9LMT0; Q9LM42; |
Protein Name | Cyclin-dependent kinase D-3 |
Protein Synonyms/Alias | CDKD; CDK-activating kinase 2-At; CAK2-At; |
Gene Name | CDKD-3 |
Gene Synonyms/Alias | CDKD-3; At1g18040; T10F20.5, T10O22.1; |
Ensembl Information | |
Organism | Arabidopsis thaliana |
Functional Description | May form a stable complex with cyclin CYCH1-1 thatphosphorylates human CDK2 and the C-terminal domain (CTD) of the large subunit of RNA polymerase II. |
Protein Length | 391 |
Protein Sequence (FASTA) | MPEQPKKVAD RYLKQEVLGQ GTYGVVFKAT DTKTEQTVAI KKIRLGKQRE GVNITALREI 60 | KMLKELKHPH IILLIDAFPH KENLHLVFEF METDLEAVIR DSNIFLSPAD IKSYLLMTFK 120 | GLAYCHDKWV LHRDMKPNNL LIGVDGQLKL ADFGLARIFG SPNRKFTHQV FARWYRAPEL 180 | LFGAKQYGAA VDVWAVACIF AELLLRRPFL QGNSDIDQLS KIFAAFGTPK ADQWPDLTKL 240 | PDYVEYQFVP APSLRSLFPA VSDDALDLLS KMFTYDPKAR ISIKQALEHR YFTSAPAPTD 300 | PAKLPKPVPK QDGKSSYGKH EAITVQSPPR KLRRVMPERG RVDSLKSHVD KDQQAPMSLD 360 | FTILAERPPN RPTITSADRS HLKRKLDLEF Q 391 |
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Nucleotide Sequence (FASTA) | ATGCCGGAGC AGCCAAAGAA AGTTGCTGAT AGGTATCTCA AGCAAGAGGT TCTTGGGCAA 60 | GGTACCTATG GAGTCGTCTT CAAAGCCACT GATACTAAGA CGGAACAAAC TGTAGCAATT 120 | AAGAAGATAA GGCTTGGTAA ACAAAGAGAA GGTGTAAATA TTACAGCTCT CAGAGAAATC 180 | AAAATGCTCA AAGAGCTAAA GCATCCTCAT ATTATTCTGC TCATTGATGC ATTTCCTCAC 240 | AAGGAAAACT TGCATCTTGT CTTTGAGTTC ATGGAGACTG ACCTCGAAGC AGTTATTCGC 300 | GATTCTAACA TTTTCCTCTC ACCCGCCGAC ATTAAATCCT ACCTCCTAAT GACATTTAAA 360 | GGACTTGCTT ATTGCCACGA TAAATGGGTT TTGCACAGGG ATATGAAGCC AAATAACTTG 420 | TTAATAGGAG TTGATGGACA GCTTAAGCTT GCAGATTTTG GCTTAGCACG TATATTTGGT 480 | AGTCCAAATC GTAAGTTTAC CCACCAGGTG TTTGCTAGAT GGTACAGAGC ACCAGAACTT 540 | TTGTTTGGTG CAAAACAATA TGGTGCTGCA GTTGATGTTT GGGCCGTTGC CTGCATATTC 600 | GCCGAACTTC TACTACGCAG ACCATTTCTT CAGGGAAACA GTGATATTGA TCAATTAAGC 660 | AAAATATTTG CTGCTTTTGG GACACCAAAA GCAGATCAGT GGCCGGATTT AACAAAGCTT 720 | CCAGATTATG TAGAGTATCA ATTTGTCCCT GCACCGTCTC TACGTTCTTT ATTCCCAGCA 780 | GTTAGTGATG ATGCTCTCGA CTTGTTGTCC AAAATGTTTA CCTATGACCC AAAGGCTAGA 840 | ATTTCCATTA AGCAGGCTCT AGAACACAGG TACTTCACTT CTGCACCTGC TCCTACTGAC 900 | CCGGCTAAGC TCCCAAAGCC CGTTCCTAAG CAGGATGGTA AATCATCTTA CGGTAAACAT 960 | GAGGCCATTA CAGTGCAATC ACCACCACGT AAGCTTAGAA GAGTGATGCC TGAGCGTGGG 1020 | AGGGTTGATA GTTTGAAGTC TCATGTTGAC AAGGATCAAC AAGCACCCAT GTCATTAGAT 1080 | TTTACCATCC TCGCTGAGCG ACCTCCAAAC AGGCCAACAA TCACCAGTGC TGATAGATCT 1140 | CATCTGAAGA GGAAACTCGA TCTTGAGTTC CAGTAA 1176 |
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Domain Profile | S: 1 yeklekigeGtygkvykakdketgevvAlKkirlekekegvpitalrEisllkelkhkni 60 | y k e +g+Gtyg+v+ka+d++t+++vA+Kkirl k++egv+italrEi++lkelkh++i | Q: 12 YLKQEVLGQGTYGVVFKATDTKTEQTVAIKKIRLGKQREGVNITALREIKMLKELKHPHI 71 | 667889****************************************************** |
| S: 61 vkLlevvakdkkklyLvfefleqdLkkllkkkkkkklsleevkslllqlleglaylHsnk 120 | + L++ + +k++l+Lvfef+e+dL+ +++++++ ls++++ks+ll+ ++glay+H+++ | Q: 72 ILLIDAFP-HKENLHLVFEFMETDLEAVIRDSNI-FLSPADIKSYLLMTFKGLAYCHDKW 129 | ********.99***********************.************************* |
| S: 121 ilHRDlKpqNlLiskegklklaDfGlarafssplktytkevvTlwYraPelLlgakeYst 180 | +lHRD+Kp+NlLi +g+lklaDfGlar f+sp++++t++v +wYraPelL+gak+Y+ | Q: 130 VLHRDMKPNNLLIGVDGQLKLADFGLARIFGSPNRKFTHQVFARWYRAPELLFGAKQYGA 189 | ************************************************************ |
| S: 181 avDiWsvgcilaelltrkplfqgkseidqlerifkllgtpsekvwpevsklpeykksfpk 240 | avD+W+v ci+aell r+p++qg+s+idql++if+ +gtp+ ++wp+++klp+y +++ | Q: 190 AVDVWAVACIFAELLLRRPFLQGNSDIDQLSKIFAAFGTPKADQWPDLTKLPDYV-EYQF 248 | ******************************************************9.5555 |
| S: 241 kkkkklkekvkklkekaldllekllaldpkkRisakealqhkyf 284 | ++ +l++ +++++++aldll+k++++dpk Ris k+al+h+yf | Q: 249 VPAPSLRSLFPAVSDDALDLLSKMFTYDPKARISIKQALEHRYF 292 | 56789**************************************9 |
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Domain Sequence (FASTA) | YLKQEVLGQG TYGVVFKATD TKTEQTVAIK KIRLGKQREG VNITALREIK MLKELKHPHI 60 | ILLIDAFPHK ENLHLVFEFM ETDLEAVIRD SNIFLSPADI KSYLLMTFKG LAYCHDKWVL 120 | HRDMKPNNLL IGVDGQLKLA DFGLARIFGS PNRKFTHQVF ARWYRAPELL FGAKQYGAAV 180 | DVWAVACIFA ELLLRRPFLQ GNSDIDQLSK IFAAFGTPKA DQWPDLTKLP DYVEYQFVPA 240 | PSLRSLFPAV SDDALDLLSK MFTYDPKARI SIKQALEHRY F 281 |
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Keyword | ATP-binding; Cell cycle; Cell division; Complete proteome; Kinase; Nucleotide-binding; Nucleus; Phosphoprotein; Reference proteome; Serine/threonine-protein kinase; Transferase. |
Sequence Source | Ensembl |
Orthology | |
Gene Ontology | |
KEGG | |
InterPros | |
Pfam | |
SMARTs | |
Prosites | |
Prints | |
Created Date | 20-Feb-2013 |