EKS-ART-00230

Eukaryotic Protein Kinase & Protein Phosphatase Database

Tag

Content

EKPD ID

EKS-ART-00230

Classification

Group/Family	Score	E-Value	Start	End	Domain Length
TKL/IRAK	215.3	2.0E-63	305	579	275

Status

Reviewed

Ensembl Protein

AT1G34210.1

UniProt Accession

Q9XIC7; Q94F63;

Protein Name

Somatic embryogenesis receptor kinase 2

Protein Synonyms/Alias

AtSERK2; Somatic embryogenesis receptor-like kinase 2;

Gene Name

SERK2

Gene Synonyms/Alias

SERK2; At1g34210; F23M19.11;

Ensembl Information

Ensembl Gene ID	Ensembl Protein ID	Ensembl Transcript ID
AT1G34210	AT1G34210.1	AT1G34210.1

Organism

Arabidopsis thaliana

Functional Description

Serine/threonine-kinase involved in brassinosteroid-dependent and -independent signaling pathways. Acts redundantly with SERK1 as a control point for sporophytic development controlling male gametophyte production.

Protein Length

628

Protein Sequence
(FASTA)

MGRKKFEAFG FVCLISLLLL FNSLWLASSN MEGDALHSLR ANLVDPNNVL QSWDPTLVNP 60

CTWFHVTCNN ENSVIRVDLG NADLSGQLVP QLGQLKNLQY LELYSNNITG PVPSDLGNLT 120

NLVSLDLYLN SFTGPIPDSL GKLFKLRFLR LNNNSLTGPI PMSLTNIMTL QVLDLSNNRL 180

SGSVPDNGSF SLFTPISFAN NLDLCGPVTS RPCPGSPPFS PPPPFIPPPI VPTPGGYSAT 240

GAIAGGVAAG AALLFAAPAL AFAWWRRRKP QEFFFDVPAE EDPEVHLGQL KRFSLRELQV 300

ATDSFSNKNI LGRGGFGKVY KGRLADGTLV AVKRLKEERT PGGELQFQTE VEMISMAVHR 360

NLLRLRGFCM TPTERLLVYP YMANGSVASC LRERPPSQLP LAWSIRQQIA LGSARGLSYL 420

HDHCDPKIIH RDVKAANILL DEEFEAVVGD FGLARLMDYK DTHVTTAVRG TIGHIAPEYL 480

STGKSSEKTD VFGYGIMLLE LITGQRAFDL ARLANDDDVM LLDWVKGLLK EKKLEMLVDP 540

DLQSNYTEAE VEQLIQVALL CTQSSPMERP KMSEVVRMLE GDGLAEKWDE WQKVEVLRQE 600

VELSSHPTSD WILDSTDNLH AMELSGPR 628

Nucleotide Sequence
(FASTA)

ATGGGGAGAA AAAAGTTTGA AGCTTTTGGT TTTGTCTGCT TAATCTCACT GCTTCTTCTG 60

TTTAATTCGT TATGGCTTGC CTCTTCTAAC ATGGAAGGTG ATGCACTGCA CAGTTTGAGA 120

GCTAATCTAG TTGATCCAAA TAATGTCTTG CAAAGCTGGG ATCCTACGCT TGTTAATCCG 180

TGTACTTGGT TTCACGTAAC GTGTAACAAC GAGAACAGTG TTATAAGAGT CGATCTTGGG 240

AATGCAGACT TGTCTGGTCA GTTGGTTCCT CAGCTAGGTC AGCTCAAGAA CTTGCAGTAC 300

TTGGAGCTTT ATAGTAATAA CATAACCGGG CCGGTTCCAA GCGATCTTGG GAATCTGACA 360

AACTTAGTGA GCTTGGATCT TTACTTGAAC AGCTTCACTG GTCCAATTCC AGATTCTCTA 420

GGAAAGCTAT TCAAGCTTCG CTTTCTTCGG CTCAACAATA ACAGTCTCAC CGGACCAATT 480

CCCATGTCAT TGACTAATAT CATGACCCTT CAAGTTTTGG ATCTGTCGAA CAACCGATTA 540

TCCGGATCTG TTCCTGATAA TGGTTCCTTC TCGCTCTTCA CTCCCATCAG TTTTGCTAAC 600

AACTTGGATC TATGCGGCCC AGTTACTAGC CGTCCTTGTC CTGGATCTCC CCCGTTTTCT 660

CCTCCACCAC CTTTTATACC ACCTCCCATA GTTCCTACAC CAGGTGGGTA TAGTGCTACT 720

GGAGCCATTG CGGGAGGAGT TGCTGCTGGT GCTGCTTTAC TATTTGCTGC CCCTGCTTTA 780

GCTTTTGCTT GGTGGCGTAG AAGAAAACCT CAAGAATTCT TCTTTGATGT TCCTGCCGAA 840

GAGGACCCTG AGGTTCACTT GGGGCAGCTT AAGCGGTTCT CTCTACGGGA ACTTCAAGTA 900

GCAACTGATA GCTTCAGCAA CAAGAACATT TTGGGCCGAG GTGGGTTCGG AAAAGTCTAC 960

AAAGGCCGTC TTGCTGATGG AACACTTGTT GCAGTCAAAC GGCTTAAAGA AGAGCGAACC 1020

CCAGGTGGCG AGCTCCAGTT TCAGACAGAA GTGGAGATGA TAAGCATGGC CGTTCACAGA 1080

AATCTCCTCA GGCTACGCGG TTTCTGTATG ACCCCTACCG AGAGATTGCT TGTTTATCCT 1140

TACATGGCTA ATGGAAGTGT CGCTTCCTGT TTGAGAGAAC GTCCACCATC ACAGTTGCCT 1200

CTAGCCTGGT CAATAAGACA GCAAATCGCG CTAGGATCAG CGAGGGGTTT GTCTTATCTT 1260

CATGATCATT GCGACCCCAA AATTATTCAC CGTGATGTGA AAGCTGCTAA TATTCTGTTG 1320

GACGAGGAAT TTGAGGCGGT GGTAGGTGAT TTCGGGTTAG CTAGACTTAT GGACTATAAA 1380

GATACTCATG TCACAACGGC TGTGCGTGGG ACTATTGGAC ACATTGCTCC TGAGTATCTC 1440

TCAACTGGAA AATCTTCAGA GAAAACTGAT GTTTTTGGCT ACGGGATCAT GCTTTTGGAA 1500

CTGATTACAG GTCAGAGAGC TTTTGATCTT GCAAGACTGG CGAATGACGA TGACGTTATG 1560

CTCCTAGATT GGGTGAAAGG GCTTTTGAAG GAGAAGAAGC TGGAGATGCT TGTGGATCCT 1620

GACCTGCAAA GCAATTACAC AGAAGCAGAA GTAGAACAGC TCATACAAGT GGCTCTTCTC 1680

TGCACACAGA GCTCACCTAT GGAACGACCT AAGATGTCTG AGGTTGTTCG AATGCTTGAA 1740

GGTGACGGTT TAGCGGAGAA ATGGGACGAG TGGCAGAAAG TGGAAGTTCT CAGGCAAGAA 1800

GTGGAGCTCT CTTCTCACCC CACCTCTGAC TGGATCCTTG ATTCGACTGA TAATCTTCAT 1860

GCTATGGAGT TGTCTGGTCC AAGATAA 1887

Domain Profile

S: 1     fsednrigeGgfgevyrgelk.ntavavkklkeeadlslkelkqsfltElkvlarfrHdn  59

         fs++n +g+Ggfg+vy+g+l  +t vavk+lkee        + +f+tE+++++   H n

Q: 305   FSNKNILGRGGFGKVYKGRLAdGTLVAVKRLKEERT---PGGELQFQTEVEMISMAVHRN  361

         789999************9862679*******9864...556779***************

S: 60    ilellgysaeseklcLvYqymknGsLedrLqcq.kgsepLsWpqRlsillGtaraiefLH  118

         +l l g+++   +  LvY+ym+nGs+   L+ +   + pL+W +R +i+lG ar++++LH

Q: 362   LLRLRGFCMTPTERLLVYPYMANGSVASCLRERpPSQLPLAWSIRQQIALGSARGLSYLH  421

         ********************************978889**********************

S: 119   easp.slihgdiksaNiLLDekltpKlgDfglarfapesekqsstvlrtskvrgtlaYlp  177

         ++ + ++ih+d+k+aNiLLDe++++ +gDfglar        ++t + t  vrgt   ++

Q: 422   DHCDpKIIHRDVKAANILLDEEFEAVVGDFGLAR----LMDYKDTHV-TTAVRGTIGHIA  476

         99888*****************************....445555555.7889********

S: 178   eefirvgqltvkvDvySfGiVllEvltGlra....vdedrktkyLkdllkeeieeekvei  233

         +e++ +g+ + k+Dv+ +Gi llE++tG+ra    +  + + + L+d +k  ++e+k+e+

Q: 477   PEYLSTGKSSEKTDVFGYGIMLLELITGQRAfdlaRLANDDDVMLLDWVKGLLKEKKLEM  536

         *******************************77666789999***************665

S: 234   lekfldkkag.kleeellealielalaclaekakkrPtmsqvlell  278

             +d   + +  e+ +e+li++al c+++   +rP+ms+v+++l

Q: 537   ---LVDPDLQsNYTEAEVEQLIQVALLCTQSSPMERPKMSEVVRML  579

         ...56655441446777899**********************9876

Domain Sequence
(FASTA)

FSNKNILGRG GFGKVYKGRL ADGTLVAVKR LKEERTPGGE LQFQTEVEMI SMAVHRNLLR 60

LRGFCMTPTE RLLVYPYMAN GSVASCLRER PPSQLPLAWS IRQQIALGSA RGLSYLHDHC 120

DPKIIHRDVK AANILLDEEF EAVVGDFGLA RLMDYKDTHV TTAVRGTIGH IAPEYLSTGK 180

SSEKTDVFGY GIMLLELITG QRAFDLARLA NDDDVMLLDW VKGLLKEKKL EMLVDPDLQS 240

NYTEAEVEQL IQVALLCTQS SPMERPKMSE VVRML 275

Keyword

ATP-binding; Cell membrane; Complete proteome; Glycoprotein; Kinase; Leucine-rich repeat; Lipid-binding; Membrane; Nucleotide-binding; Phosphoprotein; Receptor; Reference proteome; Repeat; Serine/threonine-protein kinase; Signal; Transferase; Transmembrane; Transmembrane helix.

Sequence Source

Ensembl

Orthology

Ortholog group

Arabidopsis lyrata"; ?>Glycine max"; ?>Musa acuminata"; ?>Oryza brachyantha"; ?>Oryza glaberrima"; ?>Oryza indica"; ?>Oryza sativa"; ?>Physcomitrella patens"; ?>Populus trichocarpa"; ?>Selaginella moellendorffii"; ?>Setaria italica"; ?>Solanum lycopersicum"; ?>Solanum tuberosum"; ?>Zea mays"; ?>

Gene Ontology

GO:0016021	; C:integral to membrane
GO:0005886	; C:plasma membrane
GO:0005524	; F:ATP binding
GO:0008289	; F:lipid binding
GO:0004674	; F:protein serine/threonine kinase activity
GO:0009556	; P:microsporogenesis
GO:0010152	; P:pollen maturation

KEGG

ath:AT1G34210

;

InterPros

IPR013320	; ConA-like_subgrp.
IPR011009	; Kinase-like_dom.
IPR001611	; Leu-rich_rpt.
IPR013210	; LRR-contain_N2.
IPR000719	; Prot_kinase_cat_dom.
IPR017441	; Protein_kinase_ATP_BS.
IPR001245	; Ser-Thr/Tyr_kinase_cat_dom.
IPR008271	; Ser/Thr_kinase_AS.

Pfam

PF00560	; LRR_1; 2.
PF08263	; LRRNT_2; 1.
PF07714	; Pkinase_Tyr; 1.

SMARTs

Prosites

PS00107	; PROTEIN_KINASE_ATP; 1.
PS50011	; PROTEIN_KINASE_DOM; 1.
PS00108	; PROTEIN_KINASE_ST; 1.

Prints

Created Date

20-Feb-2013