EKS-NOL-00456
Eukaryotic Protein Kinase & Protein Phosphatase Database
TagContent
EKPD IDEKS-NOL-00456
Classification
Group/FamilyScoreE-ValueStartEndDomain Length
Atypical/TIF1N/AN/AN/AN/AN/A
StatusUnreviewed
Ensembl ProteinENSNLEP00000013612
UniProt AccessionG1RK55;
Protein Name
Protein Synonyms/Alias
Gene NameTRIM28
Gene Synonyms/Alias TRIM28;
Ensembl Information
Ensembl Gene IDEnsembl Protein IDEnsembl Transcript ID
ENSNLEG00000011189ENSNLEP00000013612ENSNLET00000014289
OrganismNomascus leucogenys
Functional Description
Protein Length821
Protein Sequence
(FASTA)
MAASAAAASA AAASAASGSP GPGESSAGGE KRSTAFAAAS ASASAAASSP AGGGAEALEL 60
LEHCVCRERL RPEREPRLLP CLHSACSACL GPAAPAAANS SGDGGAAGDG AVVDCPVCKQ 120
QCFSKDIVEN YFMRDSGSKA ATDAQDANQC CTSCEDNAPA TSYCVECSEP LCETCVEAHQ 180
RVKYTKDHTV RSTGPAKSRD GERTVYCNVH KHEPLVLFCE SCDTLTCRDC QLNAHKDHQY 240
QFLEDAVRNQ RKLLASLVKR LGDKHATLQK STKEVRSSIR QVSDVQKRVQ VDVKMAILQI 300
MKELNKRGRV LVNDAQKVTE GQQERLERQH WTMTKIQKHQ EHILRFASWA LESDNNTALL 360
LSKKLIYFQL HRALKMIVDP VEPHGEMKFQ WDLNAWTKSA EAFGGSPALP CSVITPRAAP 420
TYVSLFFVQA RFMAPPLGVE VDGGWGCTHA RLLIYRSRSG EGEVSGLMRK VPRVSLERLD 480
LDLTADSQPP VFKVFPGSTT EDYNLIVIER GAAAAATGQP GTAPAGTPGA PPLAGMAMVK 540
EEETEAAIGA PPTATDGPET KPVLMALAEG PGDEGPRLAS PTGSTSSGLE VVAPDATSAP 600
SGGPVTLDDS GTICRVCQKP GDLVMCNQCE FCFHLDCHLP ALQDVPGEEW SCSLCHVLPD 660
LKEEDGSLSL DGADSTGVVA KLSPANQRKC ERVLLALFCH EPCRPLHQLA TDSTFSLDQP 720
GGTLDLTLIR ARLQEKLSPP YSSPQEFAQD VGRMFKQFNK LTEDKADVQS IIGLQRFFEM 780
RMNEAFGDTK FSAVLVEPPP MSLPGAGLSS QELSGGPGDG P 821
Nucleotide Sequence
(FASTA)
ATGGCGGCCT CGGCGGCGGC AGCCTCGGCA GCAGCGGCCT CGGCCGCCTC TGGCAGCCCG 60
GGCCCGGGCG AAAGCTCCGC TGGCGGCGAA AAGCGCTCCA CCGCCTTCGC CGCAGCCTCG 120
GCCTCTGCCT CAGCCGCGGC GTCGTCGCCC GCGGGGGGCG GCGCCGAGGC GCTGGAGCTG 180
CTGGAGCACT GCGTGTGCAG AGAGCGCCTG CGACCCGAGA GGGAGCCCCG CCTGCTGCCC 240
TGTTTGCACT CGGCCTGTAG TGCCTGCTTA GGGCCTGCGG CGCCCGCCGC CGCCAACAGC 300
TCGGGGGACG GCGGGGCGGC GGGCGACGGC GCCGTGGTGG ACTGTCCCGT GTGCAAGCAA 360
CAGTGCTTCT CCAAAGACAT CGTGGAGAAT TATTTCATGC GTGATAGTGG CAGCAAGGCT 420
GCCACCGACG CCCAGGATGC GAACCAGTGC TGCACTAGCT GTGAGGATAA TGCCCCAGCC 480
ACCAGCTACT GTGTGGAGTG CTCGGAGCCT CTGTGTGAGA CCTGTGTAGA GGCGCACCAG 540
CGGGTGAAGT ACACCAAGGA CCACACTGTG CGCTCTACTG GGCCAGCCAA GTCTCGGGAT 600
GGTGAACGTA CCGTCTATTG CAACGTACAC AAGCATGAAC CCCTTGTGCT GTTTTGTGAG 660
AGCTGTGATA CTCTCACCTG CCGAGACTGC CAGCTCAATG CCCACAAGGA CCACCAGTAC 720
CAGTTCTTAG AGGATGCAGT GAGGAACCAG CGCAAGCTCC TGGCCTCACT GGTGAAGCGC 780
CTTGGGGACA AACATGCAAC ATTGCAGAAG AGCACCAAGG AGGTTCGCAG CTCGATCCGC 840
CAGGTGTCTG ACGTACAGAA GCGTGTGCAA GTGGATGTCA AGATGGCCAT CCTGCAGATC 900
ATGAAGGAGT TGAATAAGCG GGGCCGTGTG CTGGTCAACG ATGCCCAGAA GGTGACTGAG 960
GGGCAGCAGG AGCGCCTGGA GCGGCAGCAC TGGACCATGA CCAAGATCCA GAAGCACCAG 1020
GAGCACATTC TGCGCTTTGC CTCTTGGGCT CTAGAGAGTG ACAACAACAC AGCCCTTCTG 1080
CTTTCTAAGA AGTTGATCTA CTTCCAGCTG CACCGGGCCC TCAAGATGAT TGTGGATCCC 1140
GTGGAGCCAC ATGGCGAGAT GAAGTTTCAG TGGGACCTCA ATGCCTGGAC CAAGAGTGCC 1200
GAGGCCTTCG GTGGGTCCCC AGCTCTACCT TGCTCTGTTA TTACCCCACG TGCTGCACCT 1260
ACTTATGTTT CTCTCTTCTT TGTGCAGGCA AGATTTATGG CACCTCCCCT GGGGGTGGAG 1320
GTGGATGGAG GGTGGGGGTG TACTCATGCC AGGTTGCTGA TCTACAGGTC CCGCTCAGGT 1380
GAGGGCGAGG TGAGCGGCCT TATGCGCAAG GTGCCACGAG TGAGCCTTGA ACGCCTGGAC 1440
CTGGACCTCA CGGCTGACAG CCAGCCACCC GTCTTCAAGG TCTTCCCAGG CAGTACCACT 1500
GAGGACTACA ACCTTATTGT TATTGAACGT GGCGCTGCCG CTGCAGCTAC CGGCCAGCCA 1560
GGGACTGCGC CTGCAGGAAC CCCTGGTGCC CCACCCCTGG CTGGCATGGC CATGGTCAAG 1620
GAGGAGGAGA CGGAGGCTGC CATTGGAGCC CCTCCTACTG CCACTGATGG CCCTGAGACC 1680
AAACCTGTGC TTATGGCTCT TGCGGAGGGT CCTGGTGATG AGGGTCCCCG CCTGGCCTCA 1740
CCTACTGGCA GCACTAGCTC AGGGCTGGAG GTGGTGGCTC CTGACGCTAC CTCAGCCCCA 1800
AGTGGTGGCC CGGTAACCCT GGATGACAGT GGTACCATTT GCCGTGTCTG CCAGAAGCCA 1860
GGCGATCTGG TCATGTGCAA CCAGTGTGAG TTTTGTTTCC ACCTGGACTG TCACCTGCCG 1920
GCCCTGCAGG ATGTACCAGG GGAGGAGTGG AGCTGCTCAC TCTGCCATGT GCTCCCTGAC 1980
CTGAAGGAGG AGGATGGCAG CCTCAGCCTG GATGGTGCAG ACAGCACTGG TGTGGTGGCC 2040
AAGCTTTCAC CAGCCAACCA GCGGAAATGT GAGCGTGTAC TGCTGGCCCT ATTCTGTCAT 2100
GAACCCTGCC GCCCCCTGCA TCAGCTGGCT ACCGACTCCA CCTTCTCCCT GGACCAGCCC 2160
GGTGGCACCT TGGATCTGAC CCTGATCCGT GCCCGCCTCC AGGAGAAGTT GTCACCTCCC 2220
TACAGCTCCC CACAGGAGTT TGCCCAGGAT GTGGGCCGCA TGTTCAAGCA ATTCAACAAG 2280
TTAACTGAGG ACAAGGCAGA CGTGCAGTCC ATCATCGGCC TGCAGCGCTT CTTCGAGATG 2340
CGCATGAACG AGGCCTTCGG TGACACCAAG TTCTCTGCTG TGCTGGTGGA GCCCCCGCCG 2400
ATGAGCCTGC CTGGTGCTGG CCTGAGTTCC CAGGAGCTGT CTGGCGGCCC TGGTGATGGC 2460
CCCTGA 2466
Domain Profile
N/A
Domain Sequence
(FASTA)
N/A
KeywordComplete proteome; Metal-binding; Reference proteome; Zinc; Zinc-finger.
Sequence SourceEnsembl
Orthology
Ortholog group
Anolis carolinensis"; ?>Callithrix jacchus"; ?>Canis familiaris"; ?>Cavia porcellus"; ?>Echinops telfairi"; ?>Equus caballus"; ?>Erinaceus europaeus"; ?>Felis catus"; ?>Homo sapiens"; ?>Ictidomys tridecemlineatus"; ?>Latimeria chalumnae"; ?>Loxodonta africana"; ?>Macaca mulatta"; ?>Macropus eugenii"; ?>Mus musculus"; ?>Mustela putorius furo"; ?>Myotis lucifugus"; ?>Ornithorhynchus anatinus"; ?>Oryctolagus cuniculus"; ?>Otolemur garnettii"; ?>Pan troglodytes"; ?>Pelodiscus sinensis"; ?>Pongo abelii"; ?>Procavia capensis"; ?>Pteropus vampyrus"; ?>Rattus norvegicus"; ?>Sarcophilus harrisii"; ?>Tursiops truncatus"; ?>Xenopus tropicalis"; ?>
EKS-ANC-00490
EKS-CAJ-00512
EKS-CAF-00499
EKS-CAP-00535
EKS-ECT-00085
EKS-EQC-00483
EKS-ERE-00064
EKS-FEC-00478
EKS-HOS-00503
EKS-ICT-00478
EKS-LAC-00511
EKS-LOA-00508
EKS-MAM-00500
EKS-MAE-00085
EKS-MUM-00527
EKS-MUP-00486
EKS-MYL-00489
EKS-ORA-00433
EKS-ORC-00467
EKS-OTG-00507
EKS-PAT-00466
EKS-PES-00436
EKS-POA-00487
EKS-PRC-00084
EKS-PTV-00196
EKS-RAN-00514
EKS-SAH-00467
EKS-TUT-00203
EKS-XET-00656
Gene Ontology
GO:0005622; C:intracellular
GO:0003677; F:DNA binding
GO:0003714; F:transcription corepressor activity
GO:0004842; F:ubiquitin-protein ligase activity
GO:0008270; F:zinc ion binding
GO:0006281; P:DNA repair
GO:0045892; P:negative regulation of transcription, DNA-dependent
GO:0045739; P:positive regulation of DNA repair
GO:0051259; P:protein oligomerization
KEGG
InterPros
IPR003649; Bbox_C.
IPR001487; Bromodomain.
IPR019786; Zinc_finger_PHD-type_CS.
IPR000315; Znf_B-box.
IPR011011; Znf_FYVE_PHD.
IPR001965; Znf_PHD.
IPR019787; Znf_PHD-finger.
IPR001841; Znf_RING.
IPR013083; Znf_RING/FYVE/PHD.
Pfam
PF00628; PHD; 1.
PF00643; zf-B_box; 2.
SMARTs
SM00502; BBC; 1.
SM00336; BBOX; 2.
SM00297; BROMO; 1.
SM00249; PHD; 1.
SM00184; RING; 2.
Prosites
PS50119; ZF_BBOX; 2.
PS01359; ZF_PHD_1; 1.
PS50016; ZF_PHD_2; 1.
PS50089; ZF_RING_2; 1.
Prints
Created Date20-Feb-2013