EKS-ORC-00467
Eukaryotic Protein Kinase & Protein Phosphatase Database
TagContent
EKPD IDEKS-ORC-00467
Classification
Group/FamilyScoreE-ValueStartEndDomain Length
Atypical/TIF1N/AN/AN/AN/AN/A
StatusUnreviewed
Ensembl ProteinENSOCUP00000014282
UniProt AccessionG1TC03;
Protein Name
Protein Synonyms/Alias
Gene NameTRIM28
Gene Synonyms/Alias TRIM28;
Ensembl Information
Ensembl Gene IDEnsembl Protein IDEnsembl Transcript ID
ENSOCUG00000016607ENSOCUP00000014282ENSOCUT00000016613
OrganismOryctolagus cuniculus
Functional Description
Protein Length748
Protein Sequence
(FASTA)
SAPSRCPGPA TPALSLRSGG GLTSRLPTVV DCPVCKQQCF SKDIVENYFM RDSGSKAASD 60
AQDANQCCTS CEDNAPATSY CVECSEPLCE TCVEAHQRVK YTKDHTVRST GPAKSRDGER 120
TVYCNVHKHE PLVLFCESCD TLTCRDCQLN AHKDHQYQFL EDAVRNQRKL LASLVKRLGD 180
KHATLQKSTK EVRSSIRQVS DVQKRVQVDV KMAILQIMKE LNKRGRVLVN DAQKVTEGQQ 240
ERLERQHWTM TKIQKHQEHI LRFASWALES DNNTALLLSK KLIYFQLHRA LKMIVDPVEP 300
HGEMKFQWDL NAWTKSAEAF GKIVAERPGT NSTGPAPMAP PRAPGPLSKQ GSGSSQPMEV 360
QESYGFGSDD PYSSAEPHVS GVKRSRSGEG EVSGLMRKVP RVSLERLDLD LTADSQPPVF 420
KVFPGSTTED YNLIVIERGA AAAAAGQPGT APPGTPGAPP LPGMAIVKEE ETEAAIGAPP 480
AATEGPETKP VLMALAEGPG TEGPRLASPS GSTSSGLEVV APEGTSAPSG GPGTLDDSAT 540
ICRVCQKPGD LVMCNQCEFC FHLDCHLPAL QDVPGEEWSC SLCHVLPDLK EEDGSLSLDG 600
ADSTGVVAKL SPANQRKCER VLLALFCHEP CRPLHQLATD STFSLDQPGG TLDLTLIRAR 660
LQEKLSPPYS SPQEFAQDVG RMFKQFNKLT EDKADVQSII GLQRFFETRM NEAFGDTKFS 720
AVLVEPPPLS LPGAGLSSQD LSGPGDGP 748
Nucleotide Sequence
(FASTA)
TCTGCTCCCT CCCGGTGCCC AGGCCCTGCC ACACCTGCCC TGTCCCTTCG TTCCGGCGGT 60
GGTCTCACGT CCCGTCTCCC AACAGTGGTG GACTGTCCTG TGTGCAAGCA GCAGTGCTTC 120
TCCAAAGACA TCGTGGAGAA TTACTTTATG CGCGATAGCG GCAGCAAGGC TGCCTCCGAC 180
GCCCAAGATG CAAACCAGTG CTGCACTAGC TGTGAGGATA ATGCCCCAGC CACCAGCTAT 240
TGCGTGGAGT GTTCCGAGCC ACTGTGTGAG ACGTGCGTGG AGGCACACCA GCGGGTGAAG 300
TACACCAAGG ACCACACCGT GCGCTCCACT GGGCCGGCTA AGTCTCGGGA TGGTGAGCGT 360
ACTGTCTATT GCAATGTGCA CAAGCATGAG CCCCTCGTGC TGTTCTGTGA GAGCTGCGAC 420
ACTCTGACTT GTCGGGACTG CCAACTCAAC GCTCACAAGG ACCACCAGTA CCAGTTCCTG 480
GAGGATGCAG TGAGGAACCA GCGCAAGCTC CTGGCCTCAT TGGTGAAGCG CCTTGGGGAC 540
AAACATGCAA CGTTGCAGAA GAGCACCAAG GAGGTTCGCA GCTCGATCCG CCAGGTGTCT 600
GATGTACAGA AGCGTGTGCA GGTGGATGTC AAAATGGCCA TCTTGCAGAT CATGAAGGAG 660
CTGAACAAGC GGGGCCGTGT GTTGGTCAAC GACGCCCAGA AGGTGACTGA GGGTCAGCAG 720
GAGCGTCTGG AGCGTCAGCA CTGGACCATG ACTAAGATCC AGAAGCACCA GGAGCACATC 780
CTGCGCTTTG CCTCTTGGGC TCTGGAGAGT GACAACAACA CAGCCCTGTT GCTCTCTAAG 840
AAGCTGATCT ACTTCCAGTT GCACCGGGCC CTCAAGATGA TTGTGGATCC CGTGGAGCCA 900
CATGGCGAGA TGAAGTTTCA GTGGGACCTC AATGCCTGGA CCAAGAGTGC TGAGGCCTTT 960
GGCAAGATCG TGGCAGAGCG TCCTGGTACC AACTCTACAG GCCCTGCACC CATGGCACCT 1020
CCGAGGGCCC CAGGGCCCCT GAGCAAGCAG GGCTCTGGCA GTAGCCAGCC CATGGAGGTG 1080
CAGGAAAGCT ATGGCTTTGG ATCAGATGAT CCCTACTCAA GTGCAGAGCC TCATGTGTCA 1140
GGTGTGAAGC GGTCCCGCTC AGGTGAGGGT GAGGTGAGCG GCCTCATGCG CAAGGTGCCA 1200
CGGGTCAGCC TAGAACGTCT GGACCTGGAC CTCACAGCTG ATAGCCAGCC GCCTGTCTTC 1260
AAGGTGTTTC CAGGCAGCAC CACTGAGGAC TATAATCTCA TCGTTATTGA ACGTGGTGCT 1320
GCTGCTGCAG CAGCTGGGCA GCCTGGGACT GCACCTCCAG GAACTCCTGG TGCACCACCA 1380
CTCCCTGGCA TGGCTATTGT CAAGGAGGAG GAAACAGAGG CTGCTATTGG AGCACCTCCT 1440
GCTGCCACTG AGGGCCCGGA GACCAAGCCT GTGCTGATGG CTCTGGCAGA AGGCCCTGGC 1500
ACTGAGGGCC CCCGCCTGGC CTCACCCAGT GGCAGCACCA GCTCAGGCTT GGAGGTGGTG 1560
GCTCCTGAGG GCACCTCAGC CCCATCTGGT GGCCCGGGCA CCCTGGATGA TAGTGCTACC 1620
ATCTGCCGTG TCTGCCAGAA GCCAGGTGAC CTGGTCATGT GCAACCAGTG CGAGTTTTGC 1680
TTCCATCTGG ATTGCCACCT GCCTGCCCTG CAGGATGTGC CAGGGGAGGA GTGGAGCTGT 1740
TCGCTCTGTC ATGTGCTCCC TGATCTGAAG GAGGAGGATG GCAGCCTCAG CCTGGATGGC 1800
GCAGACAGCA CTGGCGTGGT GGCGAAGCTC TCGCCAGCCA ATCAGCGGAA ATGTGAGCGA 1860
GTCCTGCTGG CCCTGTTCTG CCACGAACCC TGTCGTCCCT TGCATCAGCT GGCTACTGAC 1920
TCTACCTTCT CCCTGGACCA GCCTGGTGGC ACCCTGGACC TGACACTGAT CCGTGCACGT 1980
CTCCAGGAGA AGTTGTCGCC CCCCTACAGC TCCCCGCAGG AATTTGCCCA GGATGTGGGC 2040
CGCATGTTCA AGCAATTCAA CAAGTTGACT GAGGACAAGG CGGACGTGCA GTCCATCATC 2100
GGCCTGCAGC GCTTCTTCGA GACACGCATG AACGAGGCCT TTGGTGATAC CAAGTTCTCT 2160
GCTGTGCTGG TGGAGCCTCC GCCACTGAGC CTGCCTGGTG CTGGCCTGAG TTCCCAGGAT 2220
CTGTCTGGCC CTGGTGATGG CCCCTGA 2247
Domain Profile
N/A
Domain Sequence
(FASTA)
N/A
KeywordComplete proteome; Metal-binding; Reference proteome; Zinc; Zinc-finger.
Sequence SourceEnsembl
Orthology
Ortholog group
Anolis carolinensis"; ?>Callithrix jacchus"; ?>Canis familiaris"; ?>Cavia porcellus"; ?>Echinops telfairi"; ?>Equus caballus"; ?>Erinaceus europaeus"; ?>Felis catus"; ?>Homo sapiens"; ?>Ictidomys tridecemlineatus"; ?>Latimeria chalumnae"; ?>Loxodonta africana"; ?>Macaca mulatta"; ?>Macropus eugenii"; ?>Mus musculus"; ?>Mustela putorius furo"; ?>Myotis lucifugus"; ?>Nomascus leucogenys"; ?>Ornithorhynchus anatinus"; ?>Otolemur garnettii"; ?>Pan troglodytes"; ?>Pelodiscus sinensis"; ?>Pongo abelii"; ?>Procavia capensis"; ?>Pteropus vampyrus"; ?>Rattus norvegicus"; ?>Sarcophilus harrisii"; ?>Tursiops truncatus"; ?>Xenopus tropicalis"; ?>
EKS-ANC-00490
EKS-CAJ-00512
EKS-CAF-00499
EKS-CAP-00535
EKS-ECT-00085
EKS-EQC-00483
EKS-ERE-00064
EKS-FEC-00478
EKS-HOS-00503
EKS-ICT-00478
EKS-LAC-00511
EKS-LOA-00508
EKS-MAM-00500
EKS-MAE-00085
EKS-MUM-00527
EKS-MUP-00486
EKS-MYL-00489
EKS-NOL-00456
EKS-ORA-00433
EKS-OTG-00507
EKS-PAT-00466
EKS-PES-00436
EKS-POA-00487
EKS-PRC-00084
EKS-PTV-00196
EKS-RAN-00514
EKS-SAH-00467
EKS-TUT-00203
EKS-XET-00656
Gene Ontology
GO:0005719; C:nuclear euchromatin
GO:0005720; C:nuclear heterochromatin
GO:0005654; C:nucleoplasm
GO:0004672; F:protein kinase activity
GO:0043565; F:sequence-specific DNA binding
GO:0003700; F:sequence-specific DNA binding transcription factor activity
GO:0003713; F:transcription coactivator activity
GO:0003714; F:transcription corepressor activity
GO:0004842; F:ubiquitin-protein ligase activity
GO:0008270; F:zinc ion binding
GO:0060028; P:convergent extension involved in axis elongation
GO:0006281; P:DNA repair
GO:0060669; P:embryonic placenta morphogenesis
GO:0001837; P:epithelial to mesenchymal transition
GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter
GO:0045739; P:positive regulation of DNA repair
GO:0045893; P:positive regulation of transcription, DNA-dependent
GO:0046777; P:protein autophosphorylation
GO:0051259; P:protein oligomerization
KEGG
InterPros
IPR003649; Bbox_C.
IPR001487; Bromodomain.
IPR019786; Zinc_finger_PHD-type_CS.
IPR000315; Znf_B-box.
IPR011011; Znf_FYVE_PHD.
IPR001965; Znf_PHD.
IPR019787; Znf_PHD-finger.
IPR013083; Znf_RING/FYVE/PHD.
Pfam
PF00628; PHD; 1.
PF00643; zf-B_box; 2.
SMARTs
SM00502; BBC; 1.
SM00336; BBOX; 2.
SM00297; BROMO; 1.
SM00249; PHD; 1.
Prosites
PS50119; ZF_BBOX; 2.
PS01359; ZF_PHD_1; 1.
PS50016; ZF_PHD_2; 1.
Prints
Created Date20-Feb-2013