EKS-RAN-00056
Eukaryotic Protein Kinase & Protein Phosphatase Database
TagContent
EKPD IDEKS-RAN-00056
Classification
Group/FamilyScoreE-ValueStartEndDomain Length
CMGC/CDK401.22.8E-1204286283
StatusReviewed
Ensembl ProteinENSRNOP00000011052
UniProt AccessionQ03114;
Protein NameCyclin-dependent kinase 5
Protein Synonyms/Alias Cell division protein kinase 5; Serine/threonine-protein kinase PSSALRE; Tau protein kinase II catalytic subunit; TPKII catalytic subunit;
Gene NameCdk5
Gene Synonyms/Alias Cdk5; Cdkn5;
Ensembl Information
Ensembl Gene IDEnsembl Protein IDEnsembl Transcript ID
ENSRNOG00000008017ENSRNOP00000011052ENSRNOT00000011052
OrganismRattus norvegicus
Functional DescriptionProline-directed serine/threonine-protein kinaseessential for neuronal cell cycle arrest and differentiation and may be involved in apoptotic cell death in neuronal diseases by triggering abortive cell cycle re-entry. Interacts with D1 and D3- type G1 cyclins. Phosphorylates SRC, NOS3, VIM/vimentin, p35/CDK5R1, MEF2A, SIPA1L1, SH3GLB1, PXN, PAK1, MCAM/MUC18, SEPT5, SYN1, DNM1, AMPH, SYNJ1, CDK16, RAC1, RHOA, CDC42, TONEBP/NFAT5, MAPT/TAU, MAP1B, histone H1, p53/TP53, HDAC1, APEX1, PTK2/FAK1, huntingtin/HTT, ATM, MAP2, NEFH and NEFM. Regulates several neuronal development and physiological processes including neuronal survival, migration and differentiation, axonal and neurite growth, synaptogenesis, oligodendrocytes differentiation, synaptic plasticity and neurotransmission, by phosphorylating key proteins. Activated by interaction with CDK5R1 (p35) and ATP6V0D1 (p39), especially in post-mitotic neurons, and promotes CDK5R1 (p35) expression in an autostimulation loop. Phosphorylates many downstream substrates such as Rho and Ras family small GTPases (e.g. PAK1, RAC1, RHOA, CDC42) or microtubule-binding proteins (e.g. MAPT/TAU, MAP2, MAP1B), and modulates actin dynamics to regulate neurite growth and/or spine morphogenesis. Phosphorylates also exocytosis associated proteins such as MCAM/MUC18, SEPT5, SYN1, and PCTAIRE 1/CDK16 as well as endocytosis associated proteins such as DNM1, AMPH and SYNJ1 at synaptic terminals. In the mature central nervous system (CNS), regulates neurotransmitter movements by phosphorylating substrates associated with neurotransmitter release and synapse plasticity; synaptic vesicle exocytosis, vesicles fusion with the presynaptic membrane, and endocytosis. Promotes cell survival by activating anti-apoptotic proteins BCL2 and STAT3, and negatively regulating of JNK3/MAPK10 activity. Phosphorylation of p53/TP53 in response to genotoxic and oxidative stresses enhances its stabilization by preventing ubiquitin ligase-mediated proteasomal degradation, and induces transactivation of p53/TP53 target genes, thus regulating apoptosis. Phosphorylation of p35/CDK5R1 enhances its stabilization by preventing calpain-mediated proteolysis producing p25/CDK5R1 and avoiding ubiquitin ligase-mediated proteasomal degradation. During aberrant cell-cycle activity and DNA damage, p25/CDK5 activity elicites cell-cycle activity and double-strand DNA breaks that precedes neuronal death by deregulating HDAC1. DNA damage triggered phosphorylation of huntingtin/HTT in nuclei of neurons protects neurons against polyglutamine expansion as well as DNA damage mediated toxicity. Phosphorylation of PXN reduces its interaction with PTK2/FAK1 in matrix-cell focal adhesions (MCFA) during oligodendrocytes (OLs) differentiation. Negative regulator of Wnt/beta-catenin signaling pathway. Activator of the GAIT (IFN-gamma-activated inhibitor of translation) pathway, which suppresses expression of a post-transcriptional regulon of proinflammatory genes in myeloid cells; phosphorylates the linker domain of glutamyl-prolyl tRNA synthetase (EPRS) in a IFN-gamma- dependent manner, the initial event in assembly of the GAIT complex. Phosphorylation of SH3GLB1 is required for autophagy induction in starved neurons. Phosphorylation of TONEBP/NFAT5 in response to osmotic stress mediates its rapid nuclear localization. MEF2 is inactivated by phosphorylation in nucleus in response to neurotoxin, thus leading to neuronal apoptosis. APEX1 AP-endodeoxyribonuclease is repressed by phosphorylation, resulting in accumulation of DNA damage and contributing to neuronal death. NOS3 phosphorylation down regulates NOS3-derived nitrite (NO) levels. SRC phosphorylation mediates its ubiquitin- dependent degradation and thus leads to cytoskeletal reorganization. May regulate endothelial cell migration and angiogenesis via the modulation of lamellipodia formation. Involved in dendritic spine morphogenesis by mediating the EFNA1- EPHA4 signaling (By similarity).
Protein Length292
Protein Sequence
(FASTA)
MQKYEKLEKI GEGTYGTVFK AKNRETHEIV ALKRVRLDDD DEGVPSSALR EICLLKELKH 60
KNIVRLHDVL HSDKKLTLVF EFCDQDLKKY FDSCNGDLDP EIVKSLLFQL LKGLGFCHSR 120
NVLHRDLKPQ NLLINRNGEL KLADFGLARA FGIPVRCYSA EVVTLWYRPP DVLFGAKLYS 180
TSIDMWSAGC IFAELANAGR PLFPGNDVDD QLKRIFRLLG TPTEEQWPAM TKLPDYKPYP 240
MYPATTSLVN VVPKLNATGR DLLQNLLKCN PVQRISAEEA LQHPYFSDFC PP 292
Nucleotide Sequence
(FASTA)
ATGCAGAAAT ACGAGAAACT GGAGAAGATT GGGGAAGGCA CCTACGGAAC TGTGTTCAAG 60
GCCAAAAACC GGGAAACCCA TGAGATTGTG GCTCTGAAGC GAGTCAGGCT GGACGATGAC 120
GATGAGGGTG TGCCAAGTTC AGCCCTCCGG GAGATCTGTC TACTCAAAGA ACTGAAGCAC 180
AAAAACATTG TCAGGCTTCA TGATGTCCTG CATAGTGACA AGAAGCTCAC ATTGGTGTTT 240
GAGTTCTGTG ATCAGGACCT GAAGAAATAT TTTGACAGCT GCAATGGTGA CCTGGACCCT 300
GAGATTGTGA AGTCACTCCT CTTCCAGCTG CTGAAAGGCC TGGGATTCTG TCACAGCCGT 360
AACGTGCTGC ACAGGGACCT GAAGCCCCAG AATCTGCTCA TTAACAGGAA TGGGGAACTG 420
AAATTGGCTG ATTTTGGCCT GGCCCGAGCC TTTGGTATCC CAGTCCGCTG CTACTCTGCT 480
GAGGTGGTCA CGCTGTGGTA CCGCCCACCG GATGTCCTCT TTGGGGCCAA GCTGTACTCC 540
ACGTCCATCG ACATGTGGTC AGCCGGCTGC ATCTTTGCAG AGCTGGCCAA TGCAGGGCGA 600
CCTCTCTTCC CCGGCAATGA TGTGGATGAC CAGCTGAAGA GGATCTTTCG ACTGCTAGGG 660
ACACCGACTG AGGAACAGTG GCCTGCCATG ACCAAACTGC CAGACTATAA GCCCTACCCA 720
ATGTACCCAG CTACAACATC CTTGGTGAAT GTCGTGCCCA AACTCAATGC CACGGGGAGA 780
GACCTGTTGC AGAACCTGTT GAAGTGTAAC CCAGTGCAGC GCATCTCGGC AGAGGAGGCC 840
TTGCAGCACC CCTATTTCTC TGACTTCTGT CCCCCGTAG 879
Domain Profile
S: 1     yeklekigeGtygkvykakdketgevvAlKkirlekekegvpitalrEisllkelkhkni  60
         yeklekigeGtyg+v+kak++et+e+vAlK++rl++++egvp++alrEi llkelkhkni
Q: 4     YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI  63
         99**********************************************************
S: 61    vkLlevvakdkkklyLvfefleqdLkkllkkkkkkklsleevkslllqlleglaylHsnk  120
         v+L++v++ ++kkl+Lvfef++qdLkk++++++  +l++e vksll+qll+gl ++Hs++
Q: 64    VRLHDVLH-SDKKLTLVFEFCDQDLKKYFDSCNG-DLDPEIVKSLLFQLLKGLGFCHSRN  121
         ********.99***********************.*************************
S: 121   ilHRDlKpqNlLiskegklklaDfGlarafssplktytkevvTlwYraPelLlgakeYst  180
         +lHRDlKpqNlLi+++g+lklaDfGlaraf+ p++ y+ evvTlwYr+P++L+gak Yst
Q: 122   VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYST  181
         ************************************************************
S: 181   avDiWsvgcilaellt.rkplfqgkseidqlerifkllgtpsekvwpevsklpeykksfp  239
         ++D+Ws+gci+ael++  +plf+g++  dql+rif+llgtp+e++wp ++klp+yk  +p
Q: 182   SIDMWSAGCIFAELANaGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPAMTKLPDYK-PYP  240
         **************97369*************************************.555
S: 240   kkkkk.klkekvkklkekaldllekllaldpkkRisakealqhkyf  284
          ++++ +l ++v+kl+ +++dll++ll+++p +Risa+ealqh+yf
Q: 241   MYPATtSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYF  286
         5555559**************************************9
Domain Sequence
(FASTA)
YEKLEKIGEG TYGTVFKAKN RETHEIVALK RVRLDDDDEG VPSSALREIC LLKELKHKNI 60
VRLHDVLHSD KKLTLVFEFC DQDLKKYFDS CNGDLDPEIV KSLLFQLLKG LGFCHSRNVL 120
HRDLKPQNLL INRNGELKLA DFGLARAFGI PVRCYSAEVV TLWYRPPDVL FGAKLYSTSI 180
DMWSAGCIFA ELANAGRPLF PGNDVDDQLK RIFRLLGTPT EEQWPAMTKL PDYKPYPMYP 240
ATTSLVNVVP KLNATGRDLL QNLLKCNPVQ RISAEEALQH PYF 283
KeywordAcetylation; Apoptosis; ATP-binding; Cell cycle; Cell division; Cell junction; Cell membrane; Cell projection; Complete proteome; Cytoplasm; Kinase; Membrane; Neurodegeneration; Neurogenesis; Nucleotide-binding; Nucleus; Phosphoprotein; Postsynaptic cell membrane; Reference proteome; Serine/threonine-protein kinase; Synapse; Transferase.
Sequence SourceEnsembl
Orthology
Ortholog group
Ailuropoda melanoleuca"; ?>Bos taurus"; ?>Caenorhabditis elegans"; ?>Callithrix jacchus"; ?>Canis familiaris"; ?>Cavia porcellus"; ?>Ciona intestinalis"; ?>Ciona savignyi"; ?>Danio rerio"; ?>Dipodomys ordii"; ?>Drosophila melanogaster"; ?>Equus caballus"; ?>Felis catus"; ?>Gadus morhua"; ?>Gasterosteus aculeatus"; ?>Gorilla gorilla"; ?>Homo sapiens"; ?>Ictidomys tridecemlineatus"; ?>Latimeria chalumnae"; ?>Loxodonta africana"; ?>Macaca mulatta"; ?>Microcebus murinus"; ?>Monodelphis domestica"; ?>Mus musculus"; ?>Mustela putorius furo"; ?>Myotis lucifugus"; ?>Nomascus leucogenys"; ?>Ochotona princeps"; ?>Oreochromis niloticus"; ?>Oryctolagus cuniculus"; ?>Oryzias latipes"; ?>Otolemur garnettii"; ?>Pan troglodytes"; ?>Pongo abelii"; ?>Sarcophilus harrisii"; ?>Sus scrofa"; ?>Takifugu rubripes"; ?>Tetraodon nigroviridis"; ?>Tupaia belangeri"; ?>Tursiops truncatus"; ?>Xenopus tropicalis"; ?>Xiphophorus maculatus"; ?>
EKS-AIM-00053
EKS-BOT-00059
EKS-CAE-00041
EKS-CAJ-00055
EKS-CAF-00060
EKS-CAP-00057
EKS-CII-00021
EKS-CIS-00065
EKS-DAR-00072
EKS-DIO-00033
EKS-DRM-00024
EKS-EQC-00060
EKS-FEC-00056
EKS-GAM-00026
EKS-GAA-00075
EKS-GOG-00057
EKS-HOS-00059
EKS-ICT-00055
EKS-LAC-00064
EKS-LOA-00058
EKS-MAM-00058
EKS-MIM-00029
EKS-MOD-00063
EKS-MUM-00058
EKS-MUP-00061
EKS-MYL-00060
EKS-NOL-00055
EKS-OCP-00040
EKS-ORN-00077
EKS-ORC-00056
EKS-ORL-00070
EKS-OTG-00062
EKS-PAT-00054
EKS-POA-00055
EKS-SAH-00055
EKS-SUS-00052
EKS-TAR-00078
EKS-TEN-00095
EKS-TUB-00035
EKS-TUT-00057
EKS-XET-00071
EKS-XIM-00075
Gene Ontology
GO:0030424; C:axon
GO:0030054; C:cell junction
GO:0016533; C:cyclin-dependent protein kinase 5 holoenzyme complex
GO:0005737; C:cytoplasm
GO:0005829; C:cytosol
GO:0030175; C:filopodium
GO:0030426; C:growth cone
GO:0030027; C:lamellipodium
GO:0016020; C:membrane
GO:0031594; C:neuromuscular junction
GO:0043025; C:neuronal cell body
GO:0043204; C:perikaryon
GO:0005886; C:plasma membrane
GO:0014069; C:postsynaptic density
GO:0045211; C:postsynaptic membrane
GO:0030549; F:acetylcholine receptor activator activity
GO:0005524; F:ATP binding
GO:0004693; F:cyclin-dependent protein kinase activity
GO:0005176; F:ErbB-2 class receptor binding
GO:0043125; F:ErbB-3 class receptor binding
GO:0050321; F:tau-protein kinase activity
GO:0048675; P:axon extension
GO:0048148; P:behavioral response to cocaine
GO:0070509; P:calcium ion import
GO:0051301; P:cell division
GO:0007160; P:cell-matrix adhesion
GO:0007417; P:central nervous system development
GO:0021954; P:central nervous system neuron development
GO:0021697; P:cerebellar cortex formation
GO:0022038; P:corpus callosum development
GO:0030866; P:cortical actin cytoskeleton organization
GO:0048813; P:dendrite morphogenesis
GO:0009790; P:embryo development
GO:0021766; P:hippocampus development
GO:0006886; P:intracellular protein transport
GO:0021819; P:layer formation in cerebral cortex
GO:0008045; P:motor neuron axon guidance
GO:0045786; P:negative regulation of cell cycle
GO:0046826; P:negative regulation of protein export from nucleus
GO:0031397; P:negative regulation of protein ubiquitination
GO:0031914; P:negative regulation of synaptic plasticity
GO:0045892; P:negative regulation of transcription, DNA-dependent
GO:0051402; P:neuron apoptotic process
GO:0001764; P:neuron migration
GO:0006913; P:nucleocytoplasmic transport
GO:0048709; P:oligodendrocyte differentiation
GO:0018105; P:peptidyl-serine phosphorylation
GO:0018107; P:peptidyl-threonine phosphorylation
GO:0045956; P:positive regulation of calcium ion-dependent exocytosis
GO:0043525; P:positive regulation of neuron apoptotic process
GO:0032092; P:positive regulation of protein binding
GO:0045860; P:positive regulation of protein kinase activity
GO:0090314; P:positive regulation of protein targeting to membrane
GO:0046777; P:protein autophosphorylation
GO:0035418; P:protein localization to synapse
GO:0032801; P:receptor catabolic process
GO:0043113; P:receptor clustering
GO:0045055; P:regulated secretory pathway
GO:0030334; P:regulation of cell migration
GO:0061001; P:regulation of dendritic spine morphogenesis
GO:0060079; P:regulation of excitatory postsynaptic membrane potential
GO:0048167; P:regulation of synaptic plasticity
GO:0009611; P:response to wounding
GO:0014044; P:Schwann cell development
GO:0019233; P:sensory perception of pain
GO:0033136; P:serine phosphorylation of STAT3 protein
GO:0007519; P:skeletal muscle tissue development
GO:0007416; P:synapse assembly
GO:0001963; P:synaptic transmission, dopaminergic
GO:0035249; P:synaptic transmission, glutamatergic
GO:0048488; P:synaptic vesicle endocytosis
GO:0008542; P:visual learning
KEGG
rno:140908;
InterPros
IPR011009; Kinase-like_dom.
IPR000719; Prot_kinase_cat_dom.
IPR017441; Protein_kinase_ATP_BS.
IPR002290; Ser/Thr_dual-sp_kinase_dom.
IPR008271; Ser/Thr_kinase_AS.
Pfam
PF00069; Pkinase; 1.
SMARTs
SM00220; S_TKc; 1.
Prosites
PS00107; PROTEIN_KINASE_ATP; 1.
PS50011; PROTEIN_KINASE_DOM; 1.
PS00108; PROTEIN_KINASE_ST; 1.
Prints
Created Date20-Feb-2013