EKS-SUS-00056
Eukaryotic Protein Kinase & Protein Phosphatase Database
TagContent
EKPD IDEKS-SUS-00056
Classification
Group/FamilyScoreE-ValueStartEndDomain Length
CMGC/CDK374.53.9E-112302594293
StatusUnreviewed
Ensembl ProteinENSSSCP00000017763
UniProt AccessionF1SSC2;
Protein Name
Protein Synonyms/Alias
Gene NameCDK13
Gene Synonyms/Alias CDK13;
Ensembl Information
Ensembl Gene IDEnsembl Protein IDEnsembl Transcript ID
ENSSSCG00000016769ENSSSCP00000017763ENSSSCT00000018255
OrganismSus scrofa
Functional Description
Protein Length1110
Protein Sequence
(FASTA)
RRSAKSRSRS PYSSRHSRSR SRHRLSRSRS RHSSISPSTL TLKSSLAAEL NKNKKARAAE 60
AARAAEAAKA AEAAKAAEAA AKAAKASNTS TPTKGNTETG ASASQTNHVK DAKKLKIEHA 120
PSPSSSGTLK NDKAKTKPPL QVTKVDNNLI VDKATKKAVV VGKESKSAAT KEEPVSLKEK 180
TKPLTPSVGA KEKEQHVALV TSTLPPLPLP PMLPEDKDAD SLRGNISVKA VKKEVEKKLR 240
CLLADLPLPP ELPGGDDLSA SPEEKKTATQ LHSKRRPKIC GPRYGEIKEK DIDWGKRCVD 300
KFDIIGIIGE GTYGQVYKAR DKDTGEMVAL KKVRLDNEKE GFPITAIREI KILRQLTHQS 360
IINMKEIVTD KEDALDFKKD KGAFYLVFEY MDHDLMGLLE SGLVHFNENH IKSFMRQLME 420
GLDYCHKKNF LHRDIKCSNI LLNNRGQIKL ADFGLARLYS SEESRPYTNK VITLWYRPPE 480
LLLGEERYTP AIDVWSCGCI LGELFTKKPI FQANQELAQL ELISRICGSP CPAVWPDVIK 540
LPYFNTMKPK KQYRRKLREE FVFIPAAALD LFDYMLALDP SKRCTAEQAL QCEFLRDVEP 600
SKMPPPDLPL WQDCHELWSK KRRRQKQMGM ADDVSTVKAP RKDLSLGMDD SRTNTPQGVL 660
PSSQLKSQGN SNVAPVKTGP GQQLNHSELA ILLNLLQSKT SVSVADFVQV LNIKVNSETQ 720
QQLNKINLPA GILATGEKQT DPSTPQQESS KPLGGIQPSS QNVQPKVEAD AAQAAVQSAF 780
AVLLTQLIKA QQSKQKDVLL EEGENGSGHE AASHLRPPPE PSTPVSGQDD LMPHQDRRIL 840
EPAPEPDRPR ILPPDQRPPE PPEPPPATEE DLDYRTENQH VPTTSSSLTD PHAGVKAALL 900
QLLAQHQPQE DPKREGGIEY QAGDTYAAPS DYKDSFGASS FSSASYAGSS DGLGGGSGPP 960
LERRSFLGSS DVQPVDTYGT ASSHSGGPPP PPAFSESFPS SVAGYGDMYL SAGPMLFSGD 1020
KDHRFEYSHG PIAVLANSSD PGAGPESAHP LPAKMHNYSY GGNLQENPGG PGLLHGQTWT 1080
SPAQGPGYAQ GYRGHISTSA GRGRGRGLPY 1110
Nucleotide Sequence
(FASTA)
AGACGGTCTG CCAAATCCCG AAGCAGAAGC CCATATTCAT CTAGGCATTC AAGATCTCGT 60
AGCAGGCACA GATTATCCAG ATCCAGAAGT CGTCATTCTA GCATTTCTCC TAGCACACTA 120
ACTCTGAAGA GTAGCCTGGC AGCTGAATTG AACAAGAATA AAAAAGCACG AGCTGCAGAA 180
GCGGCAAGAG CTGCAGAAGC AGCAAAAGCT GCAGAAGCAG CTAAGGCTGC AGAGGCTGCT 240
GCCAAGGCTG CCAAAGCTTC AAACACTTCT ACACCTACCA AGGGGAACAC AGAGACTGGT 300
GCCAGTGCAT CACAAACAAA CCATGTAAAG GATGCGAAGA AACTTAAAAT TGAGCACGCA 360
CCTTCTCCCT CAAGCAGTGG AACTTTGAAA AATGACAAGG CGAAAACAAA GCCACCTCTT 420
CAGGTAACAA AGGTGGATAA TAATTTGATT GTAGATAAAG CCACCAAGAA AGCAGTTGTC 480
GTTGGGAAGG AGAGTAAATC TGCTGCTACG AAGGAAGAGC CAGTGTCTCT TAAAGAGAAA 540
ACGAAACCAC TTACACCAAG CGTAGGAGCC AAGGAGAAGG AGCAGCATGT GGCTTTAGTG 600
ACCTCTACTT TGCCGCCCTT GCCTTTGCCG CCCATGCTGC CTGAAGATAA AGATGCTGAT 660
AGCTTACGGG GAAATATTTC AGTAAAAGCA GTTAAAAAAG AAGTGGAAAA GAAACTACGA 720
TGTCTGCTTG CTGATTTACC ACTGCCCCCC GAGCTGCCAG GAGGGGATGA TCTCTCAGCG 780
AGTCCAGAGG AAAAGAAAAC AGCCACGCAG TTACATAGTA AAAGGAGGCC TAAAATATGT 840
GGGCCTCGCT ATGGTGAAAT CAAAGAAAAA GATATTGACT GGGGAAAACG CTGCGTGGAT 900
AAATTTGATA TCATCGGAAT TATTGGAGAA GGTACCTATG GACAAGTTTA CAAGGCCAGG 960
GATAAAGACA CTGGAGAAAT GGTAGCCTTA AAAAAAGTAC GTCTAGATAA CGAAAAAGAA 1020
GGATTTCCCA TTACAGCAAT CCGAGAAATT AAAATTCTTC GGCAGCTTAC CCACCAGAGT 1080
ATTATCAATA TGAAGGAAAT AGTGACTGAT AAAGAAGATG CTTTGGATTT TAAGAAAGAT 1140
AAAGGTGCAT TTTATCTAGT GTTTGAATAT ATGGACCATG ATTTGATGGG ACTACTGGAA 1200
TCAGGCTTGG TTCATTTTAA TGAAAATCAC ATAAAGTCAT TTATGAGACA GCTCATGGAA 1260
GGCCTGGATT ATTGTCATAA GAAGAATTTT TTGCACAGAG ATATTAAATG TTCAAATATT 1320
CTTCTAAATA ATAGAGGGCA GATAAAACTT GCAGATTTTG GACTTGCTCG ATTGTATAGC 1380
TCAGAAGAAA GTCGGCCGTA TACGAACAAG GTTATCACCT TGTGGTACCG TCCACCCGAA 1440
CTGCTGCTGG GAGAAGAAAG ATACACACCA GCTATCGACG TGTGGAGCTG CGGATGTATC 1500
CTTGGTGAAC TCTTCACGAA GAAACCTATA TTTCAAGCAA ATCAGGAACT TGCACAACTA 1560
GAGTTAATAA GCCGTATATG TGGGAGTCCA TGTCCTGCAG TGTGGCCAGA TGTCATCAAA 1620
CTACCGTATT TCAACACTAT GAAACCAAAG AAGCAGTATC GTCGAAAGTT AAGAGAAGAA 1680
TTTGTTTTTA TTCCTGCAGC CGCACTAGAC TTATTTGATT ACATGCTCGC CTTGGACCCC 1740
AGTAAGCGCT GTACTGCAGA GCAGGCTCTT CAGTGTGAGT TCCTACGGGA TGTGGAACCC 1800
TCAAAAATGC CTCCACCCGA CCTTCCTTTA TGGCAAGATT GTCATGAGTT ATGGAGTAAA 1860
AAGAGAAGAA GGCAGAAGCA GATGGGCATG GCTGATGATG TTTCCACAGT TAAAGCCCCC 1920
AGAAAGGACT TGTCTTTGGG CATGGATGAC AGCAGAACCA ACACACCTCA GGGTGTGCTG 1980
CCGTCTTCAC AGCTGAAATC TCAGGGCAAC TCGAATGTAG CACCTGTAAA AACAGGCCCT 2040
GGACAGCAGT TAAACCACAG TGAATTGGCA ATTCTACTAA ACCTACTACA GTCTAAAACA 2100
AGTGTTAGTG TGGCTGATTT TGTCCAAGTG TTGAACATTA AGGTAAACTC TGAGACTCAA 2160
CAGCAGCTAA ATAAAATAAA CCTTCCTGCT GGAATTTTGG CAACAGGTGA AAAACAGACA 2220
GACCCATCAA CACCACAGCA GGAGTCTTCG AAACCATTGG GAGGAATTCA GCCTTCTTCT 2280
CAGAATGTCC AGCCCAAAGT GGAGGCTGAT GCTGCCCAGG CGGCTGTGCA GAGCGCATTT 2340
GCGGTTCTGT TGACTCAGTT GATAAAGGCT CAGCAGTCAA AGCAGAAAGA TGTGCTTCTA 2400
GAGGAGGGGG AAAACGGATC GGGACACGAA GCGGCATCAC ACCTCCGGCC CCCTCCAGAG 2460
CCTAGCACTC CGGTGTCGGG GCAAGATGAC CTCATGCCGC ACCAAGACCG GAGGATCCTG 2520
GAGCCCGCCC CCGAGCCAGA CCGGCCCCGC ATTCTGCCCC CTGATCAGCG CCCGCCGGAG 2580
CCCCCGGAAC CCCCCCCGGC CACCGAAGAG GATCTGGATT ATCGGACAGA AAACCAGCAC 2640
GTACCCACCA CTAGTTCTTC GTTGACTGAC CCGCATGCTG GCGTGAAAGC AGCTCTGTTG 2700
CAGCTCCTCG CTCAGCACCA GCCCCAGGAG GACCCCAAAA GGGAGGGTGG CATTGAGTAC 2760
CAGGCGGGAG ACACTTACGC GGCCCCTTCG GACTACAAGG ACAGTTTCGG GGCGTCGTCT 2820
TTCTCCTCTG CCTCTTACGC CGGCAGCAGC GACGGGCTGG GGGGCGGCTC CGGCCCCCCC 2880
TTGGAACGGC GCAGCTTCCT GGGCAGCTCG GACGTGCAGC CCGTGGACAC CTACGGTACC 2940
GCGTCATCTC ACTCCGGCGG CCCGCCTCCG CCGCCCGCCT TTTCTGAGTC CTTCCCCAGC 3000
TCGGTGGCTG GGTACGGAGA CATGTACCTC AGTGCAGGCC CCATGCTCTT CAGCGGAGAC 3060
AAGGACCATC GATTCGAGTA CAGCCACGGG CCCATCGCCG TCCTGGCCAA CAGCAGCGAC 3120
CCTGGCGCGG GGCCCGAGAG CGCGCACCCT CTGCCCGCAA AGATGCACAA CTACAGCTAC 3180
GGGGGCAACT TACAGGAGAA CCCGGGCGGC CCCGGGCTCC TGCACGGACA GACCTGGACT 3240
TCCCCTGCGC AGGGACCTGG GTACGCACAG GGGTACCGGG GACACATCAG CACATCGGCT 3300
GGCAGAGGTC GAGGCAGAGG GTTACCATAC TGA 3333
Domain Profile
S: 1     yeklekigeGtygkvykakdketgevvAlKkirlekekegvpitalrEisllkelkhkni  60
         ++ +  igeGtyg+vyka+dk+tge+vAlKk+rl++ekeg+pita+rEi++l++l+h+ i
Q: 302   FDIIGIIGEGTYGQVYKARDKDTGEMVALKKVRLDNEKEGFPITAIREIKILRQLTHQSI  361
         667889******************************************************
S: 61    vkLlevva.........kdkkklyLvfefleqdLkkllkkkkkkklsleevkslllqlle  111
         ++++e+v+         kdk  +yLvfe++++dL+ ll++    +++++++ks+++ql+e
Q: 362   INMKEIVTdkedaldfkKDKGAFYLVFEYMDHDLMGLLESGLV-HFNENHIKSFMRQLME  420
         ****************8899********************999.****************
S: 112   glaylHsnkilHRDlKpqNlLiskegklklaDfGlarafssplk.tytkevvTlwYraPe  170
         gl+y+H++++lHRD+K++N+L++++g++klaDfGlar +ss+++  yt++v+TlwYr+Pe
Q: 421   GLDYCHKKNFLHRDIKCSNILLNNRGQIKLADFGLARLYSSEESrPYTNKVITLWYRPPE  480
         ***************************************7665527**************
S: 171   lLlgakeYstavDiWsvgcilaelltrkplfqgkseidqlerifkllgtpsekvwpevsk  230
         lLlg+++Y+ a+D+Ws+gcil el+t+kp+fq+++e  qle i++++g+p  +vwp+v k
Q: 481   LLLGEERYTPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRICGSPCPAVWPDVIK  540
         ************************************************************
S: 231   lpeykksfpkkkkk.klkekvkklkekaldllekllaldpkkRisakealqhky  283
         lp +++  pkk+++ kl+e++  +  +aldl++ +laldp+kR++a++alq ++
Q: 541   LPYFNTMKPKKQYRrKLREEFVFIPAAALDLFDYMLALDPSKRCTAEQALQCEF  594
         *****7777777777******999999************************988
Domain Sequence
(FASTA)
FDIIGIIGEG TYGQVYKARD KDTGEMVALK KVRLDNEKEG FPITAIREIK ILRQLTHQSI 60
INMKEIVTDK EDALDFKKDK GAFYLVFEYM DHDLMGLLES GLVHFNENHI KSFMRQLMEG 120
LDYCHKKNFL HRDIKCSNIL LNNRGQIKLA DFGLARLYSS EESRPYTNKV ITLWYRPPEL 180
LLGEERYTPA IDVWSCGCIL GELFTKKPIF QANQELAQLE LISRICGSPC PAVWPDVIKL 240
PYFNTMKPKK QYRRKLREEF VFIPAAALDL FDYMLALDPS KRCTAEQALQ CEF 293
KeywordATP-binding; Complete proteome; Nucleotide-binding; Reference proteome.
Sequence SourceEnsembl
Orthology
Ortholog group
Ailuropoda melanoleuca"; ?>Anolis carolinensis"; ?>Bos taurus"; ?>Callithrix jacchus"; ?>Canis familiaris"; ?>Cavia porcellus"; ?>Danio rerio"; ?>Drosophila melanogaster"; ?>Equus caballus"; ?>Felis catus"; ?>Gallus gallus"; ?>Gasterosteus aculeatus"; ?>Gorilla gorilla"; ?>Homo sapiens"; ?>Ictidomys tridecemlineatus"; ?>Latimeria chalumnae"; ?>Loxodonta africana"; ?>Macaca mulatta"; ?>Meleagris gallopavo"; ?>Monodelphis domestica"; ?>Mus musculus"; ?>Mustela putorius furo"; ?>Myotis lucifugus"; ?>Nomascus leucogenys"; ?>Oreochromis niloticus"; ?>Oryctolagus cuniculus"; ?>Otolemur garnettii"; ?>Pan troglodytes"; ?>Pelodiscus sinensis"; ?>Petromyzon marinus"; ?>Pongo abelii"; ?>Sarcophilus harrisii"; ?>Taeniopygia guttata"; ?>Takifugu rubripes"; ?>Tetraodon nigroviridis"; ?>Xenopus tropicalis"; ?>Xiphophorus maculatus"; ?>
EKS-AIM-00059
EKS-ANC-00053
EKS-BOT-00064
EKS-CAJ-00064
EKS-CAF-00063
EKS-CAP-00062
EKS-DAR-00079
EKS-DRM-00026
EKS-EQC-00063
EKS-FEC-00061
EKS-GAG-00052
EKS-GAA-00081
EKS-GOG-00062
EKS-HOS-00065
EKS-ICT-00067
EKS-LAC-00065
EKS-LOA-00061
EKS-MAM-00062
EKS-MEG-00049
EKS-MOD-00072
EKS-MUM-00064
EKS-MUP-00066
EKS-MYL-00063
EKS-NOL-00057
EKS-ORN-00086
EKS-ORC-00060
EKS-OTG-00078
EKS-PAT-00057
EKS-PES-00059
EKS-PEM-00035
EKS-POA-00066
EKS-SAH-00059
EKS-TAG-00053
EKS-TAR-00086
EKS-TEN-00088
EKS-XET-00065
EKS-XIM-00082
Gene Ontology
GO:0019908; C:nuclear cyclin-dependent protein kinase holoenzyme complex
GO:0016607; C:nuclear speck
GO:0005524; F:ATP binding
GO:0008353; F:RNA polymerase II carboxy-terminal domain kinase activity
GO:0000380; P:alternative mRNA splicing, via spliceosome
GO:0030097; P:hemopoiesis
GO:0070816; P:phosphorylation of RNA polymerase II C-terminal domain
KEGG
InterPros
IPR011009; Kinase-like_dom.
IPR000719; Prot_kinase_cat_dom.
IPR017441; Protein_kinase_ATP_BS.
IPR002290; Ser/Thr_dual-sp_kinase_dom.
IPR008271; Ser/Thr_kinase_AS.
Pfam
PF00069; Pkinase; 1.
SMARTs
SM00220; S_TKc; 1.
Prosites
PS00107; PROTEIN_KINASE_ATP; 1.
PS50011; PROTEIN_KINASE_DOM; 1.
PS00108; PROTEIN_KINASE_ST; 1.
Prints
Created Date20-Feb-2013