EKS-TAR-00513
Eukaryotic Protein Kinase & Protein Phosphatase Database
TagContent
EKPD IDEKS-TAR-00513
Classification
Group/FamilyScoreE-ValueStartEndDomain Length
TK/PDGFR453.41.4E-135581923343
StatusUnreviewed
Ensembl ProteinENSTRUP00000011259
UniProt AccessionH2SFS6;
Protein NameTyrosine-protein kinase receptor
Protein Synonyms/Alias
Gene NamePDGFRB (2 of 2)
Gene Synonyms/Alias PDGFRB (2 of 2);
Ensembl Information
Ensembl Gene IDEnsembl Protein IDEnsembl Transcript ID
ENSTRUG00000004733ENSTRUP00000011260ENSTRUT00000011320
ENSTRUG00000004733ENSTRUP00000011261ENSTRUT00000011321
ENSTRUG00000004733ENSTRUP00000011257ENSTRUT00000011317
ENSTRUG00000004733ENSTRUP00000011256ENSTRUT00000011316
ENSTRUG00000004733ENSTRUP00000011259ENSTRUT00000011319
ENSTRUG00000004733ENSTRUP00000011258ENSTRUT00000011318
OrganismTakifugu rubripes
Functional Description
Protein Length958
Protein Sequence
(FASTA)
MASIGGWRRS PQLLPFLLGV FLVLPEAFLS LELLPSSTEV LLRSNENFTV VCSGWSQVSW 60
LFPQDALVDG VAVEDQGSIS ILNIFNATWK HSGRYTCEEG LSSQSKSVDI FIPGPEEWFL 120
LSDLGVVMKE KEEGTIPCLV SDPQLNVSLY ERPDIPVTGL MYEPGRGFTG PLNDTSYLCV 180
ASNGRQKIES QVYYVFSVIV PKVMEVDLTV SSRVLKQGEV LTVNCTVKDT EMVYFFWDFP 240
RKQEIEPLTE FLPNRIRSFV NISKATVADS GVYACTVQET MKGQTVMENI TVTVLDQGYV 300
YLWPSGETNV SSLLHHTVEF SIEVDAHPAP TVRWTRDNQT VDKDTTSVTT TRLTGSRYMS 360
TLKLVRVRMD QTGNYAATAY NEDAEEEVVF HLEIKAPPKI TSLSEISNKV MLCVSEGAPP 420
PSVTWYGCHN SHSPRGRRCP RECHKTGKQR SHPGNPISVT PWEGSRHFNG VHSVLTLQSL 480
SSLSAVRCEA TNSAGRRARD LRIQTTSLYS QVAVLAAVLV LVFITVVFLI VLILLWRKKP 540
RYEVRWKVIE SVSPDGQQYT YLDPTHLPYN STWEVPRDNI SLGPVLGSGA FGRVVEANVS 600
GLLHSHSTTK VAIKMVKSNS GAVQSLMSEL KVLVHLGPHL NIVNLLGACT RGGPVYLITE 660
FCRHGDLVSY LERNRHTFLQ RDKQKKRYTL TSSEMSPLTV VRVTPLMMSL SDADGGYMDM 720
NKEESVEYVT MTKLSYADIE PAVYETPYTP ADQQEAMLLL SDSPLLTLHD LLSFSFQVAQ 780
AMDFLSSRNC LHRDLAARNV LVCEGKLVKV CDFGLARDLT KDQDYVAKGT SFLPVKWMSP 840
ESIFQNIYSC QSDVWSYGIL LWEIFSLGGS PYPDVPLTQE FYSALKRGYR MNRPEHAPQS 900
IFDLMKQCWE EKPQSRPTFS SLVVSVGNML TDDYKKRYHN LAENFLKGEQ PAVLRSRA 958
Nucleotide Sequence
(FASTA)
ATGGCGTCAA TCGGAGGATG GAGAAGAAGT CCTCAGTTGC TGCCCTTCCT GCTGGGTGTG 60
TTCCTGGTTC TTCCTGAAGC TTTCCTCAGT CTGGAGCTGC TTCCTTCATC CACTGAAGTC 120
CTCCTCAGAT CGAATGAAAA CTTCACTGTG GTGTGTTCTG GCTGGAGCCA GGTGTCGTGG 180
CTGTTTCCTC AGGACGCATT GGTGGATGGT GTTGCTGTGG AGGATCAGGG GTCCATTAGC 240
ATTCTGAACA TCTTCAACGC CACATGGAAA CATTCCGGGA GATACACGTG TGAGGAGGGC 300
TTGTCCTCTC AAAGCAAATC AGTGGACATC TTCATACCCG GTCCAGAGGA ATGGTTCCTC 360
CTCTCAGATC TAGGTGTAGT GATGAAGGAA AAAGAGGAAG GAACGATCCC TTGTCTGGTG 420
TCCGATCCAC AGCTCAACGT GTCACTGTAC GAACGTCCTG ATATACCAGT TACCGGTTTG 480
ATGTACGAGC CGGGCCGTGG CTTCACCGGT CCTCTGAACG ACACGTCCTA CCTGTGTGTG 540
GCCTCAAATG GAAGGCAGAA GATAGAGTCC CAGGTGTACT ATGTCTTCAG TGTCATAGTT 600
CCTAAGGTGA TGGAGGTGGA TCTGACTGTG TCCAGCAGAG TGTTGAAACA GGGGGAGGTT 660
CTGACTGTAA ACTGTACTGT CAAAGACACC GAGATGGTCT ACTTCTTCTG GGATTTTCCC 720
CGAAAACAGG AAATCGAACC TCTGACGGAG TTCCTGCCCA ATCGGATCCG CTCCTTTGTC 780
AACATCTCCA AGGCAACAGT GGCTGACTCA GGTGTTTATG CATGCACAGT ACAGGAGACT 840
ATGAAAGGTC AAACTGTCAT GGAAAACATC ACAGTGACAG TTCTGGATCA AGGTTATGTC 900
TACCTGTGGC CTTCAGGTGA GACCAACGTG TCGTCTCTCC TTCATCACAC GGTTGAGTTT 960
AGCATTGAGG TCGACGCCCA TCCTGCTCCC ACCGTCCGCT GGACCAGAGA CAACCAGACT 1020
GTCGACAAAG ACACCACCTC TGTCACCACA ACACGCCTGA CAGGAAGCAG GTATATGAGC 1080
ACGCTGAAAC TGGTTCGTGT TCGGATGGAT CAGACAGGAA ATTATGCAGC AACTGCTTAT 1140
AATGAAGACG CTGAGGAGGA GGTCGTTTTC CACCTGGAGA TCAAAGCACC CCCAAAAATC 1200
ACATCCCTGT CAGAGATCAG CAATAAGGTC ATGCTCTGTG TCAGCGAAGG AGCTCCGCCC 1260
CCATCCGTCA CCTGGTACGG CTGTCACAAT TCACACAGCC CCAGAGGGCG TCGCTGTCCG 1320
AGAGAATGTC ACAAAACTGG AAAACAAAGG AGTCACCCAG GTAACCCCAT CAGTGTAACA 1380
CCATGGGAGG GGAGCAGACA TTTTAATGGA GTACACAGTG TGCTGACTCT GCAGAGTCTC 1440
TCGTCTCTGT CGGCTGTCCG CTGTGAGGCT ACAAACTCTG CAGGACGGCG AGCCCGCGAC 1500
CTGCGAATAC AGACCACCTC TCTTTATTCC CAGGTCGCAG TTTTGGCAGC AGTTCTTGTC 1560
TTGGTCTTCA TCACTGTGGT CTTCCTCATC GTCCTCATCC TCCTGTGGAG AAAAAAACCT 1620
CGTTATGAAG TTCGGTGGAA GGTGATTGAG TCAGTCAGTC CAGATGGACA GCAGTACACC 1680
TACCTGGACC CCACCCACCT GCCCTACAAC TCCACCTGGG AGGTACCGCG GGACAACATA 1740
TCACTGGGTC CGGTCTTGGG ATCGGGTGCC TTCGGCCGTG TCGTGGAGGC AAACGTCTCT 1800
GGTTTGCTCC ACTCCCATTC TACGACTAAA GTGGCCATCA AGATGGTCAA ATCCAACAGC 1860
GGCGCGGTTC AGTCCCTGAT GTCGGAGCTG AAGGTTCTGG TTCATCTCGG CCCTCATCTG 1920
AACATTGTCA ACCTCCTGGG AGCGTGCACA AGAGGAGGTC CTGTCTATCT GATTACCGAG 1980
TTCTGTCGCC ACGGTGACCT GGTGAGCTAT CTAGAGAGGA ACAGACACAC CTTCTTGCAG 2040
AGAGACAAAC AGAAAAAAAG GTACACACTG ACATCATCAG AGATGTCACC ACTCACCGTC 2100
GTGAGGGTGA CGCCACTGAT GATGTCACTG AGCGATGCTG ACGGCGGTTA CATGGACATG 2160
AATAAGGAGG AGAGCGTTGA GTACGTCACC ATGACCAAGT TAAGCTACGC TGACATCGAA 2220
CCTGCTGTTT ACGAGACTCC ATACACACCA GCAGACCAAC AGGAGGCGAT GCTCCTCCTC 2280
AGTGACTCTC CTCTCCTGAC TCTCCATGAT CTCCTCAGCT TCTCCTTCCA GGTTGCTCAG 2340
GCCATGGACT TCCTCTCTTC CAGAAATTGT CTCCACAGAG ATCTGGCTGC GAGGAACGTC 2400
CTGGTCTGTG AGGGGAAACT GGTCAAGGTC TGCGACTTCG GTTTGGCGAG AGATCTGACG 2460
AAGGATCAGG ACTACGTCGC CAAAGGAACC AGCTTCCTTC CTGTGAAGTG GATGTCACCA 2520
GAGAGCATTT TCCAGAACAT TTACAGCTGC CAGAGTGATG TCTGGTCCTA TGGAATACTG 2580
CTATGGGAGA TTTTCTCTCT CGGTGGCAGC CCGTACCCAG ACGTCCCACT GACTCAGGAG 2640
TTTTACTCAG CTCTGAAAAG GGGTTACAGG ATGAATCGAC CCGAACACGC GCCACAGAGC 2700
ATTTTTGATC TGATGAAACA ATGCTGGGAG GAGAAACCTC AGTCCAGACC CACCTTCTCC 2760
TCACTGGTGG TCTCTGTGGG CAACATGTTG ACTGATGATT ACAAAAAGCG TTATCACAAT 2820
CTGGCTGAGA ACTTCCTGAA AGGTGAACAA CCAGCTGTCC TTCGATCCAG AGCT 2874
Domain Profile
S: 2     elGkvlGsGafGkvveatayGlsksdavlkvavkmlkstarssekealmselkilshlGe  61
         +lG vlGsGafG+vvea   Gl +s+++ kva+km+ks++     ++lmselk+l hlG+
Q: 581   SLGPVLGSGAFGRVVEANVSGLLHSHSTTKVAIKMVKSNSG--AVQSLMSELKVLVHLGP  638
         799**********************************9765..5699*************
S: 62    henivnllGactkgGpiyviteyccyGdllnylrrkresflkkslekkkekeeeldskal  121
         h+nivnllGact+gGp+y+ite+c++Gdl+ yl+r+r++fl++  +kk+ + ++ +++ l
Q: 639   HLNIVNLLGACTRGGPVYLITEFCRHGDLVSYLERNRHTFLQRDKQKKRYTLTSSEMSPL  698
         *******************************************99999999999999999
S: 122   ladkslrsksslssesseeyvdlkkd............vsdvssskadklasekkksale  169
         ++ + +   +sls ++++ y+d++k+            ++d++++       +++  +  
Q: 699   TVVRVTPLMMSLS-DADGGYMDMNKEesveyvtmtklsYADIEPAV------YETPYTPA  751
         7777777766666.99********9877664332222222222222......23333344
S: 170   revkaaleeedsevleledllsfsyqvakGmeflaskncvhrdlaarnvllteGkvvkic  229
          +++a+l   ds  l+l+dllsfs+qva+ m+fl+s+nc+hrdlaarnvl++eGk+vk+c
Q: 752   DQQEAMLLLSDSPLLTLHDLLSFSFQVAQAMDFLSSRNCLHRDLAARNVLVCEGKLVKVC  811
         455566777789************************************************
S: 230   dfGlardimkdsnyvvkGnarlpvkwmapesifdslytvksdvwsyGillweifslGstp  289
         dfGlard++kd +yv+kG+++lpvkwm+pesif+++y+ +sdvwsyGillweifslG++p
Q: 812   DFGLARDLTKDQDYVAKGTSFLPVKWMSPESIFQNIYSCQSDVWSYGILLWEIFSLGGSP  871
         ************************************************************
S: 290   ypgllvdskfyklikeGyrmaqpayateeiyeimqkcweaepekrpsfkqlv  341
         yp++++ ++fy ++k+Gyrm++p++a++ i+++m++cwe++p+ rp+f+ lv
Q: 872   YPDVPLTQEFYSALKRGYRMNRPEHAPQSIFDLMKQCWEEKPQSRPTFSSLV  923
         *************************************************997
Domain Sequence
(FASTA)
SLGPVLGSGA FGRVVEANVS GLLHSHSTTK VAIKMVKSNS GAVQSLMSEL KVLVHLGPHL 60
NIVNLLGACT RGGPVYLITE FCRHGDLVSY LERNRHTFLQ RDKQKKRYTL TSSEMSPLTV 120
VRVTPLMMSL SDADGGYMDM NKEESVEYVT MTKLSYADIE PAVYETPYTP ADQQEAMLLL 180
SDSPLLTLHD LLSFSFQVAQ AMDFLSSRNC LHRDLAARNV LVCEGKLVKV CDFGLARDLT 240
KDQDYVAKGT SFLPVKWMSP ESIFQNIYSC QSDVWSYGIL LWEIFSLGGS PYPDVPLTQE 300
FYSALKRGYR MNRPEHAPQS IFDLMKQCWE EKPQSRPTFS SLV 343
KeywordATP-binding; Complete proteome; Disulfide bond; Immunoglobulin domain; Kinase; Membrane; Nucleotide-binding; Phosphoprotein; Receptor; Reference proteome; Repeat; Transferase; Transmembrane; Transmembrane helix; Tyrosine-protein kinase.
Sequence SourceEnsembl
Orthology
Ortholog group
Oreochromis niloticus"; ?>Tetraodon nigroviridis"; ?>Xiphophorus maculatus"; ?>
EKS-ORN-00518
EKS-TEN-00515
EKS-XIM-00508
Gene Ontology
GO:0016021; C:integral to membrane
GO:0005524; F:ATP binding
GO:0004714; F:transmembrane receptor protein tyrosine kinase activity
GO:0007169; P:transmembrane receptor protein tyrosine kinase signaling pathway
KEGG
InterPros
IPR007110; Ig-like.
IPR013783; Ig-like_fold.
IPR013098; Ig_I-set.
IPR003599; Ig_sub.
IPR011009; Kinase-like_dom.
IPR000719; Prot_kinase_cat_dom.
IPR017441; Protein_kinase_ATP_BS.
IPR001245; Ser-Thr/Tyr_kinase_cat_dom.
IPR008266; Tyr_kinase_AS.
IPR020635; Tyr_kinase_cat_dom.
IPR016243; Tyr_kinase_CSF1/PDGF_rcpt.
IPR001824; Tyr_kinase_rcpt_3_CS.
Pfam
PF07679; I-set; 1.
PF07714; Pkinase_Tyr; 1.
SMARTs
SM00409; IG; 3.
SM00219; TyrKc; 1.
Prosites
PS50835; IG_LIKE; 2.
PS00107; PROTEIN_KINASE_ATP; 1.
PS50011; PROTEIN_KINASE_DOM; 1.
PS00109; PROTEIN_KINASE_TYR; 1.
PS00240; RECEPTOR_TYR_KIN_III; 1.
Prints
Created Date20-Feb-2013