EKS-SOT-00306

Eukaryotic Protein Kinase & Protein Phosphatase Database

Tag

Content

EKPD ID

EKS-SOT-00306

Classification

Group/Family	Score	E-Value	Start	End	Domain Length
TKL/IRAK	213.2	1.4E-62	302	576	275

Status

Unreviewed

Ensembl Protein

PGSC0003DMT400070820

UniProt Accession

A3R789;

Protein Name

Protein Synonyms/Alias

Somatic embryogenesis receptor-like kinase 1;

Gene Name

SERK1

Gene Synonyms/Alias

SERK1;

Ensembl Information

Ensembl Gene ID	Ensembl Protein ID	Ensembl Transcript ID
PGSC0003DMG400027536	PGSC0003DMT400070820	PGSC0003DMT400070820
PGSC0003DMG400027536	PGSC0003DMT400070819	PGSC0003DMT400070819

Organism

Solanum tuberosum

Functional Description

Protein Length

625

Protein Sequence
(FASTA)

MEKDAVVVSL VVWLILVVHH LKLIYANMEG DALHSLRVNL QDPNNVLQSW DPTLVNPCTW 60

FHVTCNNDNS VIRVDLGNAA LSGLLVPQLG LLKNLQYLEL YSNNISGLIP SDLGNLTNLV 120

SLDLYLNNFV GPIPDSLGKL SKLRFLRLNN NSLTGNIPMS LTNISSLQVL DLSNNRLSGV 180

VPDNGSFSLF TPISFANNLD LCGPVTGRPC PGSPPFSPPP PFVPPPPISA PGGNGATGAI 240

AGGVAAGAAL LFAAPAIAFA WWRRRKPQEY FFDVPAEEDP EVHLGQLKRF SLRELQVATD 300

SFSNKNILGR GGFGKVYKGR LADGSLVAVK RLKEERTPGG ELQFQTEVEM ISMAVHRNLL 360

RLRGFCMTPT ERLLVYPYMA NGSVASCLRE RPPSEPPLDW PTRKRIALGS ARGLSYLHDH 420

CDPKIIHRDV KAANILLDEE FEAVVGDFGL AKLMDYKDTH VTTAVRGTIG HIAPEYLSTG 480

KSSEKTDVFG YGIMLLELIT GQRAFDLARL ANDDDVMLLD WVKGLLKEKK LEMLVDPDLQ 540

NKYVEAEVEQ LIQVALLCTQ SNPMDRPKMS EVVRMLEGDG LAERWDEWQK VEVLRQEVEL 600

APHPGSDWLV DSTENLHAVE LSGPR 625

Nucleotide Sequence
(FASTA)

ATGGAGAAGG ATGCTGTGGT GGTGTCACTG GTGGTATGGC TAATCTTGGT TGTACATCAT 60

CTTAAGCTCA TTTATGCTAA TATGGAAGGT GATGCATTGC ATAGTCTACG CGTCAATTTA 120

CAAGATCCTA ACAATGTGCT ACAGAGCTGG GACCCTACCC TTGTTAATCC TTGCACATGG 180

TTTCATGTTA CCTGCAACAA TGACAACAGT GTTATAAGAG TTGATTTAGG AAATGCAGCT 240

TTATCTGGTC TGTTAGTCCC ACAGCTTGGC CTTTTGAAGA ATTTGCAGTA CTTGGAGCTT 300

TACAGTAATA ACATAAGTGG TCTAATACCG AGTGATCTTG GGAATTTGAC TAATTTGGTC 360

AGCTTGGATC TCTACTTGAA CAACTTCGTC GGTCCCATCC CAGATTCCTT GGGCAAGCTG 420

TCGAAATTGA GATTCCTTCG GCTCAACAAT AATAGCTTAA CTGGTAACAT CCCTATGTCA 480

CTGACTAATA TCTCATCACT ACAAGTGTTG GATCTGTCAA ACAACCGTCT CTCAGGTGTT 540

GTTCCAGATA ATGGTTCCTT TTCTCTATTC ACGCCTATCA GTTTTGCGAA TAATTTAGAT 600

CTTTGCGGGC CTGTAACTGG ACGCCCTTGT CCGGGATCTC CTCCATTCTC CCCTCCGCCT 660

CCATTTGTTC CACCACCACC AATTTCTGCT CCAGGAGGAA ATGGTGCAAC TGGAGCAATT 720

GCTGGAGGTG TAGCTGCTGG TGCTGCTCTA CTATTTGCTG CTCCTGCCAT TGCATTTGCC 780

TGGTGGCGCC GTAGAAAGCC ACAAGAATAT TTCTTTGATG TACCAGCTGA AGAAGATCCT 840

GAAGTTCACT TAGGTCAACT GAAAAGGTTC TCCCTCCGAG AGCTACAAGT TGCAACCGAC 900

AGTTTTAGCA ATAAAAATAT TCTGGGTCGA GGTGGATTTG GTAAGGTATA CAAAGGACGC 960

TTAGCAGATG GATCATTGGT GGCTGTTAAG CGGCTTAAGG AGGAGCGTAC TCCTGGAGGG 1020

GAGTTGCAAT TTCAAACAGA AGTTGAGATG ATTAGCATGG CAGTGCATAG GAATCTTCTA 1080

CGATTGCGTG GTTTCTGTAT GACACCAACT GAAAGACTGC TTGTCTACCC CTACATGGCG 1140

AATGGAAGTG TTGCATCATG CCTGAGAGAA CGACCGCCTT CTGAACCGCC ACTTGATTGG 1200

CCAACGCGAA AGCGCATTGC TTTGGGGTCT GCCAGGGGAT TATCGTATTT GCATGATCAT 1260

TGTGACCCTA AGATTATCCA TCGTGATGTG AAGGCTGCAA ATATATTGCT AGATGAAGAA 1320

TTTGAGGCTG TTGTTGGAGA CTTTGGTTTG GCTAAACTTA TGGACTACAA GGATACACAT 1380

GTTACAACTG CTGTGCGTGG TACAATTGGG CATATAGCTC CAGAATACCT GTCCACAGGG 1440

AAGTCTTCAG AAAAGACTGA TGTTTTTGGG TATGGGATCA TGCTTCTGGA GCTAATCACC 1500

GGCCAACGTG CTTTTGATCT TGCTCGGCTT GCAAATGATG ACGATGTCAT GTTGCTTGAC 1560

TGGGTGAAAG GACTCCTCAA AGAGAAGAAA TTGGAAATGC TGGTTGACCC TGATCTTCAG 1620

AACAAGTATG TGGAGGCTGA GGTGGAGCAA CTGATCCAAG TAGCATTGCT TTGTACACAA 1680

AGCAACCCAA TGGATCGGCC TAAGATGTCG GAAGTGGTGA GAATGCTTGA AGGTGATGGT 1740

TTGGCTGAAA GATGGGATGA GTGGCAGAAG GTAGAAGTTC TCCGGCAGGA AGTGGAACTT 1800

GCACCACATC CTGGTTCTGA TTGGCTTGTT GACTCAACAG AGAATTTACA CGCAGTGGAA 1860

TTATCGGGTC CAAGGTGA 1878

Domain Profile

S: 1     fsednrigeGgfgevyrgelknt.avavkklkeeadlslkelkqsfltElkvlarfrHdn  59

         fs++n +g+Ggfg+vy+g+l +   vavk+lkee        + +f+tE+++++   H n

Q: 302   FSNKNILGRGGFGKVYKGRLADGsLVAVKRLKEERT---PGGELQFQTEVEMISMAVHRN  358

         789999*************976439*******9864...556779***************

S: 60    ilellgysaeseklcLvYqymknGsLedrLqcq.kgsepLsWpqRlsillGtaraiefLH  118

         +l l g+++   +  LvY+ym+nGs+   L+ +    +pL Wp+R  i+lG ar++++LH

Q: 359   LLRLRGFCMTPTERLLVYPYMANGSVASCLRERpPSEPPLDWPTRKRIALGSARGLSYLH  418

         ********************************9778899*********************

S: 119   easp.slihgdiksaNiLLDekltpKlgDfglarfapesekqsstvlrtskvrgtlaYlp  177

         ++ + ++ih+d+k+aNiLLDe++++ +gDfgla+        ++t + t  vrgt   ++

Q: 419   DHCDpKIIHRDVKAANILLDEEFEAVVGDFGLAK----LMDYKDTHV-TTAVRGTIGHIA  473

         99888*****************************....445555555.7889********

S: 178   eefirvgqltvkvDvySfGiVllEvltGlra....vdedrktkyLkdllkeeieeekvei  233

         +e++ +g+ + k+Dv+ +Gi llE++tG+ra    +  + + + L+d +k  ++e+k+e+

Q: 474   PEYLSTGKSSEKTDVFGYGIMLLELITGQRAfdlaRLANDDDVMLLDWVKGLLKEKKLEM  533

         *******************************77666789999***************765

S: 234   lekfldkka.gkleeellealielalaclaekakkrPtmsqvlell  278

         l   +d    +k  e+ +e+li++al c++++   rP+ms+v+++l

Q: 534   L---VDPDLqNKYVEAEVEQLIQVALLCTQSNPMDRPKMSEVVRML  576

         4...5544313335566889**********************9876

Domain Sequence
(FASTA)

FSNKNILGRG GFGKVYKGRL ADGSLVAVKR LKEERTPGGE LQFQTEVEMI SMAVHRNLLR 60

LRGFCMTPTE RLLVYPYMAN GSVASCLRER PPSEPPLDWP TRKRIALGSA RGLSYLHDHC 120

DPKIIHRDVK AANILLDEEF EAVVGDFGLA KLMDYKDTHV TTAVRGTIGH IAPEYLSTGK 180

SSEKTDVFGY GIMLLELITG QRAFDLARLA NDDDVMLLDW VKGLLKEKKL EMLVDPDLQN 240

KYVEAEVEQL IQVALLCTQS NPMDRPKMSE VVRML 275

Keyword

ATP-binding; Kinase; Leucine-rich repeat; Membrane; Nucleotide-binding; Receptor; Repeat; Serine/threonine-protein kinase; Transferase; Transmembrane; Transmembrane helix.

Sequence Source

Ensembl

Orthology

Ortholog group

Arabidopsis lyrata"; ?>Arabidopsis thaliana"; ?>Brachypodium distachyon"; ?>Brassica rapa"; ?>Glycine max"; ?>Hordeum vulgare"; ?>Musa acuminata"; ?>Oryza brachyantha"; ?>Oryza glaberrima"; ?>Oryza indica"; ?>Oryza sativa"; ?>Physcomitrella patens"; ?>Populus trichocarpa"; ?>Selaginella moellendorffii"; ?>Setaria italica"; ?>Solanum lycopersicum"; ?>Sorghum bicolor"; ?>Vitis vinifera"; ?>Zea mays"; ?>

Gene Ontology

GO:0016021	; C:integral to membrane
GO:0005524	; F:ATP binding
GO:0004674	; F:protein serine/threonine kinase activity

KEGG

InterPros

IPR013320	; ConA-like_subgrp.
IPR011009	; Kinase-like_dom.
IPR001611	; Leu-rich_rpt.
IPR013210	; LRR-contain_N2.
IPR000719	; Prot_kinase_cat_dom.
IPR017441	; Protein_kinase_ATP_BS.
IPR008271	; Ser/Thr_kinase_AS.

Pfam

PF00560	; LRR_1; 1.
PF08263	; LRRNT_2; 1.
PF00069	; Pkinase; 1.

SMARTs

Prosites

PS51450	; LRR; 4.
PS00107	; PROTEIN_KINASE_ATP; 1.
PS50011	; PROTEIN_KINASE_DOM; 1.
PS00108	; PROTEIN_KINASE_ST; 1.

Prints

Created Date

20-Feb-2013