EKS-SCP-00125
Eukaryotic Protein Kinase & Protein Phosphatase Database
TagContent
EKPD IDEKS-SCP-00125
Classification
Group/FamilyScoreE-ValueStartEndDomain Length
Atypical/BRDN/AN/AN/AN/AN/A
StatusReviewed
Ensembl ProteinSPCC1450.02.1:pep
UniProt AccessionQ9Y7N0; Q9UUN2;
Protein NameSWR1 complex bromodomain subunit bdf1
Protein Synonyms/Alias
Gene Namebdf1
Gene Synonyms/Alias bdf1; brf1; SPCC1450.02, SPCC191.13;
Ensembl Information
Ensembl Gene IDEnsembl Protein IDEnsembl Transcript ID
SPCC1450.02SPCC1450.02.1:pepSPCC1450.02.1
OrganismSchizosaccharomyces pombe
Functional DescriptionComponent of the SWR1 complex which mediates the ATP-dependent exchange of histone H2A for the H2A variant HZT1 leading to transcriptional regulation of selected genes by chromatin remodeling.
Protein Length578
Protein Sequence
(FASTA)
MSSESRENEV KAETKDEIAN DGSPQLNGDN NIQSSDGHND ENEESLSRKR DSSGATVGDL 60
KQEEKESMPK KEPEPTVKKI RGSGMPPPQQ KYCLAIVRQL KRTKNSAPFK VPVDPIKQNI 120
PDYPTIVKNP MDLGTIEKKL TSYEYSVPQE FIDDMNLMFS NCFLYNGTES PVGSMGKALQ 180
EVFERQLKQL PDAEQPAAAP VKKSKQKSAS TAPPRTRRNS SVSSTSASVA ASTAPKAASP 240
AVLPEGKPRR RKNNSQMRFC STVLKELYKR QYESFAFPFY QPVDPVACDC PDYFDVIKEP 300
MDLSTIQSKL NKNEYSTLEE FESDILLMFN NCFTYNPPGT PVHVMGRQLE NVFKEKWEAR 360
PKFDDATLVK QQEAETDALF DNGEEEEALM SEEEINGAKF AAVDKQISML QDTLEAMKAK 420
KMNRMRKPRR RDLTKEYGPI TYAMQNELAE RCNYLSAEQL SNVAEILREE MPWLRDTDEI 480
EIDVGNMKPE VFHRIYRYVC KPDADSSEPA SPVLMPTKPE KKKGRVLSET EQAEKIRRLQ 540
QQLDRFAGKT SPTSPESNNA ANVSDSESDN ESESSESA 578
Nucleotide Sequence
(FASTA)
ATGAGCAGCG AATCGCGTGA AAATGAGGTC AAAGCTGAGA CAAAAGATGA AATTGCGAAT 60
GATGGGAGTC CTCAGTTAAA TGGTGATAAT AACATACAAT CAAGTGATGG TCATAACGAC 120
GAAAATGAAG AGTCGTTATC GAGGAAGCGT GACTCTTCTG GTGCGACTGT GGGCGATTTG 180
AAACAAGAGG AAAAAGAATC TATGCCCAAA AAAGAACCTG AACCGACTGT TAAAAAGATT 240
CGTGGCAGTG GAATGCCTCC GCCTCAACAA AAATATTGTT TGGCAATTGT AAGACAATTA 300
AAAAGAACCA AAAATTCCGC ACCATTTAAA GTCCCAGTAG ACCCCATAAA ACAAAACATT 360
CCAGATTATC CGACAATTGT AAAAAACCCC ATGGACTTGG GGACAATTGA AAAGAAATTA 420
ACAAGTTACG AGTACAGCGT TCCTCAAGAA TTCATTGATG ACATGAACCT GATGTTTTCA 480
AATTGTTTTT TGTATAATGG AACGGAGTCA CCAGTTGGAT CGATGGGTAA AGCTTTGCAA 540
GAGGTATTTG AGCGGCAGTT AAAACAGTTG CCCGACGCAG AACAACCCGC AGCTGCTCCC 600
GTGAAAAAGT CCAAACAAAA GTCGGCCTCA ACTGCTCCCC CTCGTACTAG AAGAAACTCA 660
TCTGTTAGCT CTACATCAGC CAGCGTTGCT GCGTCTACAG CTCCTAAAGC TGCTTCTCCA 720
GCTGTTCTCC CGGAAGGTAA ACCCAGGCGC CGTAAAAACA ACTCGCAAAT GCGCTTTTGC 780
TCAACTGTGT TAAAGGAATT ATACAAAAGA CAATACGAGT CGTTTGCTTT CCCCTTTTAT 840
CAGCCTGTTG ATCCTGTAGC TTGCGATTGT CCGGATTATT TTGATGTCAT CAAAGAACCC 900
ATGGATCTCA GCACTATACA ATCCAAATTG AACAAAAATG AGTATTCTAC TCTTGAGGAA 960
TTTGAAAGCG ACATCCTTCT TATGTTTAAC AACTGTTTCA CCTATAACCC TCCTGGCACT 1020
CCTGTTCATG TGATGGGCCG CCAATTAGAG AATGTATTTA AGGAAAAATG GGAAGCTCGT 1080
CCCAAGTTTG ATGATGCAAC CTTGGTTAAA CAACAGGAGG CGGAAACAGA TGCTTTATTC 1140
GATAATGGTG AGGAAGAGGA GGCTTTGATG TCCGAGGAAG AAATCAATGG AGCCAAGTTT 1200
GCTGCTGTGG ATAAGCAGAT ATCTATGCTA CAGGACACAT TGGAGGCAAT GAAGGCAAAA 1260
AAGATGAACC GTATGAGGAA ACCTCGTCGC CGTGATCTCA CCAAGGAATA TGGTCCTATT 1320
ACCTATGCTA TGCAAAATGA GCTTGCCGAG CGCTGTAATT ACCTCAGTGC TGAACAACTT 1380
TCAAATGTCG CTGAAATTTT ACGTGAAGAG ATGCCTTGGC TTCGTGATAC TGATGAAATT 1440
GAAATTGATG TCGGCAATAT GAAACCAGAA GTATTCCATC GTATATACCG CTATGTTTGC 1500
AAACCCGACG CCGATTCCTC TGAACCTGCT TCACCCGTCC TTATGCCAAC TAAGCCAGAG 1560
AAGAAAAAGG GCCGCGTACT TTCTGAAACG GAGCAAGCTG AAAAAATCAG ACGTTTGCAA 1620
CAACAATTAG ATCGTTTTGC TGGCAAAACG TCTCCCACTT CTCCCGAGTC AAATAACGCT 1680
GCTAATGTTT CCGATTCTGA AAGTGACAAT GAAAGTGAAA GTAGTGAATC TGCTTAA 1737
Domain Profile
N/A
Domain Sequence
(FASTA)
N/A
KeywordActivator; Bromodomain; Chromatin regulator; Complete proteome; Nucleus; Phosphoprotein; Reference proteome; Repeat; Transcription; Transcription regulation.
Sequence SourceEnsembl
Orthology
Ortholog group
Ailuropoda melanoleuca"; ?>Anolis carolinensis"; ?>Bos taurus"; ?>Caenorhabditis elegans"; ?>Callithrix jacchus"; ?>Canis familiaris"; ?>Cavia porcellus"; ?>Ciona intestinalis"; ?>Danio rerio"; ?>Dipodomys ordii"; ?>Echinops telfairi"; ?>Equus caballus"; ?>Erinaceus europaeus"; ?>Felis catus"; ?>Gadus morhua"; ?>Gallus gallus"; ?>Gasterosteus aculeatus"; ?>Gorilla gorilla"; ?>Homo sapiens"; ?>Ictidomys tridecemlineatus"; ?>Latimeria chalumnae"; ?>Loxodonta africana"; ?>Macaca mulatta"; ?>Meleagris gallopavo"; ?>Monodelphis domestica"; ?>Mus musculus"; ?>Mustela putorius furo"; ?>Myotis lucifugus"; ?>Nomascus leucogenys"; ?>Oreochromis niloticus"; ?>Ornithorhynchus anatinus"; ?>Oryctolagus cuniculus"; ?>Oryzias latipes"; ?>Otolemur garnettii"; ?>Pan troglodytes"; ?>Pelodiscus sinensis"; ?>Pongo abelii"; ?>Procavia capensis"; ?>Pteropus vampyrus"; ?>Rattus norvegicus"; ?>Sarcophilus harrisii"; ?>Sorex araneus"; ?>Sus scrofa"; ?>Taeniopygia guttata"; ?>Takifugu rubripes"; ?>Tarsius syrichta"; ?>Tetraodon nigroviridis"; ?>Tursiops truncatus"; ?>Xenopus tropicalis"; ?>Xiphophorus maculatus"; ?>Saccharomyces cerevisiae"; ?>
EKS-AIM-00464
EKS-ANC-00485
EKS-BOT-00497
EKS-CAE-00439
EKS-CAJ-00509
EKS-CAF-00504
EKS-CAP-00526
EKS-CII-00277
EKS-DAR-00928
EKS-DIO-00119
EKS-ECT-00084
EKS-EQC-00490
EKS-ERE-00066
EKS-FEC-00479
EKS-GAM-00301
EKS-GAG-00412
EKS-GAA-00602
EKS-GOG-00485
EKS-HOS-00510
EKS-ICT-00480
EKS-LAC-00519
EKS-LOA-00510
EKS-MAM-00501
EKS-MEG-00408
EKS-MOD-00489
EKS-MUM-00534
EKS-MUP-00489
EKS-MYL-00488
EKS-NOL-00449
EKS-ORN-00635
EKS-ORA-00439
EKS-ORC-00476
EKS-ORL-00578
EKS-OTG-00506
EKS-PAT-00474
EKS-PES-00442
EKS-POA-00481
EKS-PRC-00084
EKS-PTV-00196
EKS-RAN-00516
EKS-SAH-00464
EKS-SOA-00068
EKS-SUS-00438
EKS-TAG-00562
EKS-TAR-00620
EKS-TAS-00080
EKS-TEN-00629
EKS-TUT-00206
EKS-XET-00649
EKS-XIM-00625
EKS-SAC-00131
Gene Ontology
GO:0000812; C:Swr1 complex
GO:0016568; P:chromatin modification
GO:0006355; P:regulation of transcription, DNA-dependent
GO:0006351; P:transcription, DNA-dependent
KEGG
spo:SPCC1450.02;
InterPros
IPR001487; Bromodomain.
IPR018359; Bromodomain_CS.
Pfam
PF00439; Bromodomain; 2.
SMARTs
SM00297; BROMO; 2.
Prosites
PS00633; BROMODOMAIN_1; 1.
PS50014; BROMODOMAIN_2; 2.
PS51525; NET; 1.
Prints
PR00503; BROMODOMAIN.
Created Date20-Feb-2013