EKS-SOL-00243

Eukaryotic Protein Kinase & Protein Phosphatase Database

Tag

Content

EKPD ID

EKS-SOL-00243

Classification

Group/Family	Score	E-Value	Start	End	Domain Length
TKL/IRAK	213.2	8.8E-63	306	580	275

Status

Unreviewed

Ensembl Protein

Solyc04g072570.2.1

UniProt Accession

G0XZA3;

Protein Name

Protein Synonyms/Alias

Somatic embryogenesis receptor kinase 1;

Gene Name

SERK1

Gene Synonyms/Alias

SERK1;

Ensembl Information

Ensembl Gene ID	Ensembl Protein ID	Ensembl Transcript ID
Solyc04g072570.2	Solyc04g072570.2.1	Solyc04g072570.2.1

Organism

Solanum lycopersicum

Functional Description

Protein Length

629

Protein Sequence
(FASTA)

MVKVMEKDTV VVSLVVWLIL VVYHLKLIYA NMEGDALHSL RVNLQDPNNV LQSWDPTLVN 60

PCTWFHVTCN NDNSVIRVDL GNAALSGLLV PQLGLLKNLQ YLELYSNNIS GLIPSDLGNL 120

TNLVSLDLYL NNFVGPIPDS LGKLSKLRFL RLNNNSLTGN IPMSLTNISS LQVLDLSNNR 180

LSGAVPDNGS FSLFTPISFA NNLDLCGPVT GRPCPGSPPF SPPPPFVPPP PISAPGGNGA 240

TGAIAGGVAA GAALLFAAPA IAFAWWRRRK PQEYFFDVPA EEDPEVHLGQ LKRFSLRELQ 300

VATDSFSNKN ILGRGGFGKV YKGRLADGSL VAVKRLKEER TPGGELQFQT EVEMISMAVH 360

RNLLRLRGFC MTPTERLLVY PYMANGSVAS CLRERPPSEP PLDWPTRKRI ALGSARGLSY 420

LHDHCDPKII HRDVKAANIL LDEEFEAVVG DFGLAKLMDY KDTHVTTAVR GTIGHIAPEY 480

LSTGKSSEKT DVFGYGIMLL ELITGQRAFD LARLANDDDV MLLDWVKGLL KEKKLEMLVD 540

PDLQNKYVEA EVEQLIQVAL LCTQSNPMDR PKMSEVVRML EGDGLAERWD EWQKVEVLRQ 600

EVELAPHPGS DWLVDSTENL HAVELSGPR 629

Nucleotide Sequence
(FASTA)

ATGGTGAAGG TGATGGAGAA GGATACTGTG GTGGTATCAC TGGTGGTATG GCTAATCTTG 60

GTTGTATATC ATCTTAAGCT CATTTATGCT AATATGGAAG GTGATGCATT GCACAGTCTA 120

CGCGTCAATT TACAAGATCC TAACAATGTG CTACAGAGCT GGGACCCAAC CCTTGTTAAT 180

CCTTGCACAT GGTTTCACGT TACCTGCAAC AATGACAACA GTGTTATAAG AGTTGATTTA 240

GGAAATGCAG CTTTATCTGG TTTGTTAGTT CCACAGCTTG GCCTTTTGAA GAATTTGCAG 300

TACTTGGAGC TTTACAGTAA TAATATAAGT GGTCTGATAC CGAGTGATCT TGGGAATTTG 360

ACTAATCTGG TCAGCTTGGA TCTCTACTTG AACAACTTCG TCGGTCCCAT CCCAGATTCC 420

TTGGGCAAGC TGTCGAAATT GAGATTCCTT CGGCTCAACA ATAATAGCTT GACTGGTAAC 480

ATCCCAATGT CACTGACTAA TATCTCATCA CTGCAAGTGT TGGATCTGTC AAACAACCGT 540

CTCTCAGGTG CTGTTCCAGA TAATGGTTCA TTTTCTCTAT TCACGCCTAT CAGTTTTGCG 600

AATAATTTAG ATCTTTGCGG GCCTGTAACT GGACGCCCTT GCCCTGGATC TCCTCCATTC 660

TCCCCTCCGC CTCCATTTGT TCCACCACCA CCAATTTCTG CTCCAGGAGG AAATGGTGCA 720

ACTGGAGCAA TTGCTGGAGG TGTAGCTGCT GGTGCTGCTC TACTATTTGC TGCTCCTGCC 780

ATTGCATTTG CCTGGTGGCG CCGTAGAAAG CCACAAGAAT ATTTCTTTGA CGTACCAGCC 840

GAAGAAGATC CTGAAGTTCA CTTAGGTCAA CTGAAAAGGT TCTCCCTCCG AGAGCTACAA 900

GTTGCAACTG ACAGTTTTAG CAATAAAAAT ATACTGGGTC GAGGTGGATT TGGTAAGGTA 960

TACAAAGGAC GCTTAGCAGA TGGATCATTG GTGGCTGTTA AGCGGCTAAA GGAAGAGCGT 1020

ACTCCTGGAG GGGAGTTGCA ATTTCAAACA GAAGTTGAGA TGATTAGCAT GGCAGTGCAT 1080

AGGAATCTTC TACGATTGCG TGGTTTCTGT ATGACACCAA CTGAAAGACT GCTTGTCTAC 1140

CCCTACATGG CGAATGGAAG TGTTGCATCA TGCCTGAGAG AACGACCGCC TTCTGAACCA 1200

CCACTTGATT GGCCAACGCG AAAACGTATT GCTTTGGGGT CTGCCAGGGG ATTATCGTAT 1260

TTGCATGATC ATTGTGACCC TAAGATTATC CATCGTGATG TGAAGGCTGC AAATATATTG 1320

CTAGATGAAG AATTTGAGGC TGTTGTTGGA GACTTTGGTT TGGCTAAACT TATGGACTAC 1380

AAGGATACAC ATGTTACAAC TGCTGTGCGT GGTACAATCG GGCATATAGC TCCAGAATAC 1440

CTTTCCACAG GGAAGTCTTC AGAAAAGACT GATGTTTTTG GGTATGGGAT CATGCTTCTG 1500

GAGCTAATCA CCGGCCAACG TGCTTTTGAT CTTGCTCGGC TGGCAAATGA TGACGATGTC 1560

ATGTTGCTTG ACTGGGTGAA AGGACTCCTC AAAGAGAAGA AACTGGAAAT GCTGGTTGAC 1620

CCTGATCTTC AGAACAAATA TGTGGAGGCT GAGGTGGAGC AACTGATCCA GGTAGCATTG 1680

CTTTGTACAC AAAGCAACCC AATGGATCGG CCTAAGATGT CGGAAGTGGT GAGAATGCTT 1740

GAAGGTGATG GTTTGGCTGA AAGATGGGAT GAGTGGCAGA AGGTAGAAGT TCTCCGGCAG 1800

GAAGTGGAAC TTGCACCACA TCCTGGTTCT GATTGGCTTG TTGACTCGAC AGAGAATTTA 1860

CATGCAGTTG AATTATCGGG TCCAAGGTGA 1890

Domain Profile

S: 1     fsednrigeGgfgevyrgelknt.avavkklkeeadlslkelkqsfltElkvlarfrHdn  59

         fs++n +g+Ggfg+vy+g+l +   vavk+lkee        + +f+tE+++++   H n

Q: 306   FSNKNILGRGGFGKVYKGRLADGsLVAVKRLKEERT---PGGELQFQTEVEMISMAVHRN  362

         789999*************976439*******9864...556779***************

S: 60    ilellgysaeseklcLvYqymknGsLedrLqcq.kgsepLsWpqRlsillGtaraiefLH  118

         +l l g+++   +  LvY+ym+nGs+   L+ +    +pL Wp+R  i+lG ar++++LH

Q: 363   LLRLRGFCMTPTERLLVYPYMANGSVASCLRERpPSEPPLDWPTRKRIALGSARGLSYLH  422

         ********************************9778899*********************

S: 119   easp.slihgdiksaNiLLDekltpKlgDfglarfapesekqsstvlrtskvrgtlaYlp  177

         ++ + ++ih+d+k+aNiLLDe++++ +gDfgla+        ++t + t  vrgt   ++

Q: 423   DHCDpKIIHRDVKAANILLDEEFEAVVGDFGLAK----LMDYKDTHV-TTAVRGTIGHIA  477

         99888*****************************....445555555.7889********

S: 178   eefirvgqltvkvDvySfGiVllEvltGlra....vdedrktkyLkdllkeeieeekvei  233

         +e++ +g+ + k+Dv+ +Gi llE++tG+ra    +  + + + L+d +k  ++e+k+e+

Q: 478   PEYLSTGKSSEKTDVFGYGIMLLELITGQRAfdlaRLANDDDVMLLDWVKGLLKEKKLEM  537

         *******************************77666789999***************765

S: 234   lekfldkka.gkleeellealielalaclaekakkrPtmsqvlell  278

         l   +d    +k  e+ +e+li++al c++++   rP+ms+v+++l

Q: 538   L---VDPDLqNKYVEAEVEQLIQVALLCTQSNPMDRPKMSEVVRML  580

         4...5544313335566889**********************9876

Domain Sequence
(FASTA)

FSNKNILGRG GFGKVYKGRL ADGSLVAVKR LKEERTPGGE LQFQTEVEMI SMAVHRNLLR 60

LRGFCMTPTE RLLVYPYMAN GSVASCLRER PPSEPPLDWP TRKRIALGSA RGLSYLHDHC 120

DPKIIHRDVK AANILLDEEF EAVVGDFGLA KLMDYKDTHV TTAVRGTIGH IAPEYLSTGK 180

SSEKTDVFGY GIMLLELITG QRAFDLARLA NDDDVMLLDW VKGLLKEKKL EMLVDPDLQN 240

KYVEAEVEQL IQVALLCTQS NPMDRPKMSE VVRML 275

Keyword

ATP-binding; Kinase; Leucine-rich repeat; Membrane; Nucleotide-binding; Receptor; Repeat; Serine/threonine-protein kinase; Transferase; Transmembrane; Transmembrane helix.

Sequence Source

Ensembl

Orthology

Ortholog group

Arabidopsis lyrata"; ?>Arabidopsis thaliana"; ?>Brachypodium distachyon"; ?>Brassica rapa"; ?>Glycine max"; ?>Musa acuminata"; ?>Oryza brachyantha"; ?>Oryza glaberrima"; ?>Oryza indica"; ?>Oryza sativa"; ?>Physcomitrella patens"; ?>Populus trichocarpa"; ?>Selaginella moellendorffii"; ?>Setaria italica"; ?>Solanum tuberosum"; ?>Sorghum bicolor"; ?>Vitis vinifera"; ?>Zea mays"; ?>

Gene Ontology

GO:0016021	; C:integral to membrane
GO:0005524	; F:ATP binding
GO:0004674	; F:protein serine/threonine kinase activity

KEGG

InterPros

IPR013320	; ConA-like_subgrp.
IPR011009	; Kinase-like_dom.
IPR001611	; Leu-rich_rpt.
IPR013210	; LRR-contain_N2.
IPR000719	; Prot_kinase_cat_dom.
IPR017441	; Protein_kinase_ATP_BS.
IPR008271	; Ser/Thr_kinase_AS.

Pfam

PF00560	; LRR_1; 3.
PF08263	; LRRNT_2; 1.
PF00069	; Pkinase; 1.

SMARTs

Prosites

PS00107	; PROTEIN_KINASE_ATP; 1.
PS50011	; PROTEIN_KINASE_DOM; 1.
PS00108	; PROTEIN_KINASE_ST; 1.

Prints

Created Date

20-Feb-2013